Complete Genome Assembly of subsp. DC283, a Corn Pathogen.

Genome Announc

Department of Biological Sciences, Virginia Tech, Blacksburg, Virginia, USA

Published: June 2017

The phytopathogen subsp. DC283 causes Stewart's wilt disease in corn after transmission from the corn flea beetle insect vector. Here, we report that the complete annotated genome of DC283 has been fully assembled into one circular chromosome, 10 circular plasmids, and one linear phage.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5454200PMC
http://dx.doi.org/10.1128/genomeA.00435-17DOI Listing

Publication Analysis

Top Keywords

subsp dc283
8
complete genome
4
genome assembly
4
assembly subsp
4
dc283 corn
4
corn pathogen
4
pathogen phytopathogen
4
phytopathogen subsp
4
dc283 stewart's
4
stewart's wilt
4

Similar Publications

First Report of subsp. Causing Bacterial Leaf Wilt of Sugarcane in China.

Plant Dis

October 2020

Fujian Agriculture and Forestry University, Sugarcane Research Institute, 15 Shang Xia Dian Rd, Cangshan District, Fuzhou, Fujian, China, 350002;

Article Synopsis
  • The pathogen Pantoea stewartii subsp. stewartii (Pss), known for causing bacterial wilt in corn, was observed infecting sugarcane in Zhanjiang, China, manifesting as leaf blade bleaching and necrotic lesions.
  • Leaf samples from affected sugarcane cultivars were collected and analyzed using nested PCR, confirming the presence of Pss through high nucleotide identity with known strains.
  • The study involved isolating a specific colony, PSCN1, from a sugarcane cultivar and verifying its identity through additional PCR methods aimed at the 16S rRNA gene.
View Article and Find Full Text PDF

A Gram-negative bacterium, subspecies ( subsp. ) has been recognized as the causative agent for jackfruit bronzing disease in Malaysia. Here, we report the whole genome sequencing dataset of subsp.

View Article and Find Full Text PDF

Complete Genome Assembly of subsp. DC283, a Corn Pathogen.

Genome Announc

June 2017

Department of Biological Sciences, Virginia Tech, Blacksburg, Virginia, USA

The phytopathogen subsp. DC283 causes Stewart's wilt disease in corn after transmission from the corn flea beetle insect vector. Here, we report that the complete annotated genome of DC283 has been fully assembled into one circular chromosome, 10 circular plasmids, and one linear phage.

View Article and Find Full Text PDF

Inheritance of Pantoea type III secretion systems through both vertical and horizontal transfer.

Mol Genet Genomics

December 2015

Department of Biology, University of Regina, 3737 Wascana Parkway, Regina, SK, S4S0A2, Canada.

The type III secretion system (T3SS) is an extracellular apparatus used by many Gram-negative bacteria to deliver effector proteins directly into plant and animal cells, thereby facilitating host-specific association. Strains of the enterobacterial genus, Pantoea, have been isolated from a wide variety of hosts, including plants, insects, and humans, yet it is unclear whether the T3SS may be involved in these associations. In this study, we use comparative genomics and phylogenetic methods to examine the origin and distribution of T3SSs in 35 sequenced environmental and clinical strains of Pantoea.

View Article and Find Full Text PDF

Miniprimer PCR assay targeting multiple genes: a new rapid and reliable tool for genotyping Pantoea stewartii subsp. stewartii.

Lett Appl Microbiol

February 2010

Environmental Health Program (Biodiversity), Agriculture and Agri-Food Canada, Ottawa, ON, Canada.

Aim: Development of a 'miniprimer' PCR assay for genotyping Pantoea stewartii subsp. stewartii, the causal agent of the Stewart's bacterial wilt on maize.

Methods And Results: Four 10-nucleotide (10-nt) 'miniprimer' sets were designed and evaluated in the presence of Titanium Taq DNA polymerase.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!