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Subtractive genome mining in Xanthomonas citri pv. citri strain 306 for identifying novel drug target proteins coupled with in-depth protein-protein interaction and coevolution analysis - A leap towards prospective drug design.
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January 2025
Department of Botany, Vivekananda Mahavidyalaya, Haripal, Hooghly, 712405, West Bengal, India. Electronic address:
Citrus canker poses a serious threat to a highly significant citrus fruit crop, this disease caused by one of the most destructive bacterial plant pathogens Xanthomonas citri pv. citri (Xcc). Bacterial plant diseases significantly reduce crop yields worldwide, making it more difficult to supply the growing food demand.
View Article and Find Full Text PDFPlastid-nuclear coevolution of ribosomal protein genes in papilionoid legumes.
Mol Phylogenet Evol
December 2024
Department of Integrative Biology, University of Texas at Austin, Austin, TX, USA.
In plants, cellular function is orchestrated by three distinct genomes located within the nucleus, mitochondrion, and plastid. These genomes are interdependent, requiring tightly coordinated maintenance and expression. Plastids host several multisubunit protein complexes encoded by both the plastid and nuclear genomes.
View Article and Find Full Text PDFGenetic Warfare: The Plant Genome's Role in Fending Off Insect Invaders.
Arch Insect Biochem Physiol
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Agricultural Entomology and Pest Control, College of Plant Protection, Jilin Agricultural University, Changchun, PR China.
The plant defense against insects is multiple layers of interactions. They defend through direct defense and indirect defense. Direct defenses include both physical and chemical barriers that hinder insect growth, development, and reproduction.
View Article and Find Full Text PDFSpatiotemporal differences induced changes in the structure and function of the gut microbiota in an endangered ungulate.
Anim Microbiome
December 2024
Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing, 100101, China.
The composition and function of animal gut microbiota are shaped by various factors, among which diet is one of the major factors. Diet is affected by seasonal shifts and geographical differences, which in turn impact the host's nutritional levels. To adapt to these environmental changes, the gut microbiome often produces matching responses.
View Article and Find Full Text PDFDe novo assembly of a near-complete genome of aquatic vegetable Zizania latifolia in the Yangtze River Basin.
Sci Data
December 2024
Key Laboratory of Poyang Lake Environment and Resource Utilization, Ministry of Education, Center for Watershed Ecology, School of Life Sciences, Nanchang University, Nanchang, 330031, Jiangxi, P. R. China.
The cultivated Zizania latifolia, an aquatic vegetable prevalent in the Yangtze River Basin, represents a unique plant-fungus complex whose domestication is associated with host-parasite co-evolution. In this study, we present a high-quality, chromosome-scale genome assembly of cultivated Z. latifolia.
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