There has been increasing recognition of the occurrence of natural, halogenated organic compounds in marine and terrestrial environments. Chloroform is an example of a halogenated organic compound with natural formation as its primary source. Chloroform emission from soil has been reported from diverse Arctic, temperate, and (sub)tropical ecosystems. The terrestrial environment is a significant source to the atmosphere, but little is known about the formation pathway of chloroform in soil. Here, we present evidence that chloroform is formed through the hydrolysis of trichloroacetyl compounds in natural, organic-rich soils. In situ emissions of chloroform from soil in nine Arctic and subarctic ecosystems were linked to soil trichloroacetyl turnover. The residence time from formation of the trichloroacetyl compounds in soil to the release of chloroform to the atmosphere varied between 1 and 116 active months in unfrozen topsoil, depending on soil pH. Nonspecific halogenation that leads to trihaloacetyl formation does not discriminate between chloride and bromide, and brominated analogues were formed alongside chloroform. Soil may therefore be a previously unrecognized, natural source of brominated haloforms. The formation pathway of haloforms through trihaloacetyl compounds can most likely be extended to other ecosystems with organic topsoils.
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http://dx.doi.org/10.1021/acs.est.7b00144 | DOI Listing |
Environ Microbiol Rep
December 2024
Department of Applied Biology, Institute for Nanomaterials, Advanced Technologies and Innovation, Technical University of Liberec (TUL), Liberec, Czech Republic.
Approaches to DNA extraction play a crucial role in determining the variability of results obtained through 16S rRNA amplicon sequencing. Particularly, clay-rich samples can impede the efficiency of various standard cultivation-independent techniques. We conducted an inter-laboratory comparison study to thoroughly assess the efficacy of two published DNA extraction methods (kit-based and phenol-chloroform-based) specifically designed for bentonite samples.
View Article and Find Full Text PDFEnviron Pollut
December 2024
Department of Soil, Water and Environment, University of Dhaka, Dhaka, 1000, Bangladesh. Electronic address:
Langmuir
October 2024
Ministry of Education Key Laboratory of Laser Life Science & Guangdong Provincial Key Laboratory of Laser Life Science & Guangzhou Key Laboratory of Spectral Analysis and Functional Probes, College of Biophotonics, South China Normal University, Guangzhou 510631, China.
Obtaining reliable and informative DNA data from soil samples is challenging due to the presence of interfering substances and typically low DNA yields. In this work, we prepared poly(ethylene glycol)-modified magnetic particles (PEG@FeO) for DNA purification. The particles leverage the facilitative effect of calcium ions (Ca), which act as bridges between DNA and PEG@FeO by coordinating with the phosphate groups of DNA and the hydroxyl groups on the particles.
View Article and Find Full Text PDFPan Afr Med J
August 2024
Department of Human, Biological and Translational Medical Sciences, University of Namibia, Private Bag 13301, Mandume Ndemufayo Avenue, Pionierspark, Windhoek, Namibia.
Introduction: the present study aimed at isolating and characterizing actinomycete from unexplored Windhoek rocky crest mountainous soil and extracting bioactive metabolites as possible therapeutics against common life-threatening Streptococcus pneumonia (S. pneumonia) and Stachybotrys chartarum (S. chartarum).
View Article and Find Full Text PDFPLOS Water
March 2024
Department of Epidemiology and Environmental Health, University of Kentucky, Lexington, Kentucky, United States of America.
To increase our understanding of the factors that influence formation of disinfection byproducts (DBPs) in rural drinking systems, we investigated the spatial and seasonal variation in trihalomethane (THM) and haloacetic acid (HAA) concentrations in relation to various chemical and physical variables in a rural public drinking water system in Martin County, Kentucky, USA. We collected drinking water samples from 97 individual homes over the course of one year and analyzed them for temperature, electrical conductivity, pH, free chlorine, total chlorine, THMs (chloroform, bromodichloromethane, dibromochloromethane, dichlorobromomethane, and bromoform) and HAAs (monochloroacetic acid, dichloroacetic acid, trichloroacetic acid, bromoacetic acid, and dibromoacetic acid). Spatial autocorrelation analysis showed only weak overall clustering for HAA concentrations and none for THMs.
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