Hydroxytyrosol (HT) and a set of synthetic isochroman derivatives of HT have been studied with regards to their radical scavenging activity in the gas employing density functional theory (DFT) and the Becke's 3 Lee Yang Parr (B3LYP) functional. Values of molecular descriptors (bond dissociation enthalpy, BDE; ionization potential, IP; proton dissociation enthalpy, PDE; proton affinity, PA; electron transfer energy, ETE; electron accepting power, ɷ+; electron donating power, ɷ-; net electrophilicity, Δɷ) characterizing the hydrogen atom or electron donating efficiency of test compounds were used. Published experimental findings for the radical scavenging activity of the same compounds using methods such as Rancimat, 2,2'-azino-bis(3-ethylbenzothiazoline-6-sulphonic acid) radical cation and oxygen radical absorbance capacity were discussed. All the synthetic isochromans were predicted to be more potent hydrogen atom and electron donors than HT, though polarity may affect their performance in lipidic systems. Present findings point out that HT and examined isochromans prefer to scavenge free radicals via hydrogen atom transfer instead of electron donation and that allylic hydrogen atoms are expected to account for a higher activity in comparison to other phenolic antioxidants. The most potent hydrogen atom donor was the one bearing two catechol groups which can form stepwise a di-quinone and then scavenge additional radicals via allylic hydrogen atom donation and subsequent adduct formation. The total enthalpy required for all hydrogen atoms donated by test compounds was the most appropriate index of experimental activity prediction instead of common descriptors.
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http://dx.doi.org/10.1016/j.foodres.2015.06.040 | DOI Listing |
J Am Chem Soc
December 2024
School of Natural Sciences, Department Chemie, and Catalysis Research Center (CRC), Technische Universität München, Lichtenbergstrasse 4, 85747 Garching, Germany.
By coupling a photochemical and a thermal step, a single chiral catalyst can establish a photostationary state in which the enantiopure form of a chiral compound is favored over its racemate. Following this strategy, 3-substituted 4,7-diaza-1-isoindolones were successfully deracemized (74-98% yield, 86-99% ) employing 2.5 mol % of a photocatalyst.
View Article and Find Full Text PDFBiochemistry
January 2025
Division of Food Science and Biotechnology, Graduate School of Agriculture, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan.
CYP105A1 exhibits monooxygenase activity to a wide variety of structurally different substrates with regio- and stereospecificity, making its application range broad. Our previous studies have shown that CYP105A1 wild type and its variants metabolize 12 types of nonsteroidal anti-inflammatory drugs (NSAIDs). In particular, the R84A variant exhibited a high activity against many NSAIDs.
View Article and Find Full Text PDFJ Mol Model
January 2025
Laboratorio de Química Teórica Computacional (QTC), Facultad de Química y de Farmacia, Pontificia Universidad Católica de Chile, Avenida Vicuña Mackenna 4860, 7820436, Santiago de Chile, Chile.
Context: Dopamine -monooxygenase (D M) is an essential enzyme in the organism that regioselectively converts dopamine into R-norepinephrine, the key step of the reaction, studied in this paper, is a hydrogen atom transfer (HAT) from dopamine to a superoxo complex on D M, forming a hydroperoxo intermediate and dopamine radical. It was found that the formation of a hydrogen bond between dopamine and the D M catalyst strengthens the substrate-enzyme interaction and facilitates the HAT which takes place selectively to give the desired enantiomeric form of the product. Six reactions leading to the hydroperoxo intermediate were analyzed in detail using theoretical and computational tools in order to identify the most probable reaction mechanism.
View Article and Find Full Text PDFJ Chem Phys
January 2025
Machine Learning Group, Technische Universität Berlin, 10587 Berlin, Germany.
We recently introduced the Alchemical Integral Transform (AIT), enabling the prediction of energy differences, and guessed an ansatz to parameterize space r in some alchemical change λ. Here, we present a rigorous derivation of AIT's kernel K and discuss the parameterization r(λ) in n dimensions, i.e.
View Article and Find Full Text PDFProteins
January 2025
Department of Biophysics, All India Institute of Medical Sciences, New Delhi, India.
Lactoperoxidase (LPO) is a heme-containing mammalian enzyme that is found in the extracellular fluids of animals including plasma, saliva, airway epithelial and nasal lining fluids, milk, tears, and gastric juices. LPO uses hydrogen peroxide (HO) to convert substrates into oxidized products. Previous structural studies have shown that HO, CO, and CN are bound to LPO at the distal heme cavity by coordinating with heme iron.
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