Most previous work in population ecology has modeled density-dependent effects in isolation. In this paper, we concurrently modeled the effect of density-dependent and density-independent factors on the rate of population change (R ) in Peromyscus leucopus (white-footed mouse), using a Ricker equation expanded to include weather and seasonality. From 1973 to 1996, we live-trapped P. leucopus monthly in a 2-ha Ohio woodlot. Population peaks (July to August) varied from 27 to 181 individuals, while troughs (December to March) varied from 4 to 46 individuals. We used time-delayed densities to act as surrogates for unobserved density-dependent factors, and principal components to represent 12 highly collinear weather variables. We identified time-delayed correlations by season between R and the independent variables (i.e., previous densities and weather principal components) using transfer function analysis. In summer, when P. leucopus densities were above the seasonal mean for the month, R was lower in the following 2 months; however, in winter, R was greater in the first but lower in the second succeeding month. R also correlated positively in autumn with contemporaneous precipitation, and was negatively correlated with `extreme' weather in summer with 2- and 3-month lags and in winter with a 3-month lag. We hypothesize that precipitation affected juveniles by influencing food resources and that `extreme' weather affected breeding. Our model explained 65% of the variability in R , and density-dependent and density-independent factors explained an equal percentage of that variability. This model created good forecasts of population density up to 12 months in the future.
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Theory Biosci
January 2025
Faculty of Science and Engineering, Department of Biosciences, Swansea University, Singleton Park, Swansea, SA2 8PP, UK.
Despite being a powerful tool to model ecological interactions, traditional evolutionary game theory can still be largely improved in the context of population dynamics. One of the current challenges is to devise a cohesive theoretical framework for ecological games with density-dependent (or concentration-dependent) evolution, especially one defined by individual-level events. In this work, I use the notation of reaction networks as a foundation to propose a framework and show that classic two-strategy games are a particular case of the theory.
View Article and Find Full Text PDFAppl Environ Microbiol
January 2025
Department of Biology, Indiana University, Bloomington, Indiana, USA.
The bacterial pathogen causes disease in coral species worldwide. The mechanisms of coral colonization, coral microbiome interactions, and virulence factor production are understudied. In other model species, virulence factors like biofilm formation, toxin secretion, and protease production are controlled through a density-dependent communication system called quorum sensing (QS).
View Article and Find Full Text PDFJ Phys Chem B
January 2025
Applied Theoretical Physics - Computational Physics, Physikalisches Institut, Albert-Ludwigs-Universität Freiburg, 79104 Freiburg, Germany.
The self-assembly of biological membraneless organelles can be mimicked by active droplets resulting from chemically fueled microphase separation. However, how the nonequilibrium, transient structure of these active droplets can be controlled through the physicochemical input parameters is not yet well understood. In our work, a chemically fueled two-state chemical reaction and subsequent droplet growth and decay are modeled with a reactive Brownian dynamics simulation in two spatial dimensions.
View Article and Find Full Text PDFACS Omega
December 2024
Western Australia School of Mines, Minerals, Energy and Chemical Engineering, Curtin University, 26 Dick Perry Avenues, Kensington, 6151 WA, Australia.
Ecol Lett
December 2024
Department of Biology, University of Rochester, Rochester, New York, USA.
Isolation caused by anthropogenic habitat fragmentation can destabilize populations. Populations relying on the inflow of immigrants can face reduced fitness due to inbreeding depression as fewer new individuals arrive. Empirical studies of the demographic consequences of isolation are critical to understand how populations persist through changing conditions.
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