Immunoinformatics Features Linked to Leishmania Vaccine Development: Data Integration of Experimental and In Silico Studies.

Int J Mol Sci

Grupo Informática de Biossistemas e Genômica, Programa de Pós-graduação em Ciências da Saúde, Centro de Pesquisas René Rachou, Fiocruz Minas, Av. Augusto de Lima, 1715, Barro Preto, 30.190-002 Belo Horizonte, Minas Gerais, Brazil.

Published: February 2017

Leishmaniasis is a wide-spectrum disease caused by parasites from genus. There is no human vaccine available and it is considered by many studies as apotential effective tool for disease control. To discover novel antigens, computational programs have been used in reverse vaccinology strategies. In this work, we developed a validation antigen approach that integrates prediction of B and T cell epitopes, analysis of Protein-Protein Interaction (PPI) networks and metabolic pathways. We selected twenty candidate proteins from tested in murine model, with experimental outcome published in the literature. The predictions for CD4⁺ and CD8⁺ T cell epitopes were correlated with protection in experimental outcomes. We also mapped immunogenic proteins on PPI networks in order to find Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways associated with them. Our results suggest that non-protective antigens have lowest frequency of predicted T CD4⁺ and T CD8⁺ epitopes, compared with protective ones. T CD4⁺ and T CD8⁺ cells are more related to leishmaniasis protection in experimental outcomes than B cell predicted epitopes. Considering KEGG analysis, the proteins considered protective are connected to nodes with few pathways, including those associated with ribosome biosynthesis and purine metabolism.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5343906PMC
http://dx.doi.org/10.3390/ijms18020371DOI Listing

Publication Analysis

Top Keywords

cd4⁺ cd8⁺
12
cell epitopes
8
ppi networks
8
protection experimental
8
experimental outcomes
8
immunoinformatics features
4
features linked
4
linked leishmania
4
leishmania vaccine
4
vaccine development
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!