Phosphoinositides are rapidly turning-over phospholipids that play key roles in intracellular signaling and modulation of membrane effectors. Through technical refinements we have improved sensitivity in the analysis of the phosphoinositide PI, PIP, and PIP pools from living cells using mass spectrometry. This has permitted further resolution in phosphoinositide lipidomics from cell cultures and small samples of tissue. The technique includes butanol extraction, derivatization of the lipids, post-column infusion of sodium to stabilize formation of sodiated adducts, and electrospray ionization mass spectrometry in multiple reaction monitoring mode, achieving a detection limit of 20pg. We describe the spectrum of fatty-acyl chains in the cellular phosphoinositides. Consistent with previous work in other mammalian primary cells, the 38:4 fatty-acyl chains dominate in the phosphoinositides of the pineal gland and of superior cervical ganglia, and many additional fatty acid combinations are found at low abundance. However, Chinese hamster ovary cells and human embryonic kidney cells (tsA201) in culture have different fatty-acyl chain profiles that change with growth state. Their 38:4 lipids lose their dominance as cultures approach confluence. The method has good time resolution and follows well the depletion in <20s of both PIP and PIP that results from strong activation of G-coupled receptors. The receptor-activated phospholipase C exhibits no substrate selectivity among the various fatty-acyl chain combinations.
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http://dx.doi.org/10.1016/j.bbalip.2017.02.002 | DOI Listing |
Nat Commun
March 2025
Department of Biochemistry, Tennis Court Road, Cambridge, UK.
Fatty acids are a primary source of carbon for Pseudomonas aeruginosa (PA) in the airways of people with cystic fibrosis (CF). Here, we use tandem mass-tag proteomics to analyse the protein expression profile of a CF clinical isolate grown on different fatty acids. Two fatty acyl-CoA dehydrogenases (designated FadE1 and FadE2) are strongly induced during growth on fatty acids.
View Article and Find Full Text PDFCell Mol Gastroenterol Hepatol
March 2025
Department of Pathology, Dalhousie University, Halifax, NS, Canada; Keenan Research Centre for Biomedical Science, St. Michael's Hospital, Unity Health, Toronto, Toronto, ON, Canada; Department of Biochemistry and Molecular Biology, Dalhousie University, Halifax, NS, Canada. Electronic address:
Background And Aims: NOD2 is an intracellular innate immune receptor that detects bacterial peptidoglycan fragments. Although nominally soluble, some NOD2 is associated with the plasma membrane and endosomal compartments for microbial surveillance. This membrane targeting is achieved through post-translational S-acylation of NOD2 by the protein acyltransferase ZDHHC5.
View Article and Find Full Text PDFPhys Chem Chem Phys
March 2025
CSIR-National Chemical Laboratory, Dr Homi Bhabha Road, Pune 411 008, India.
Omega fatty acids are currently being marketed as healthy food supplements as they have been implicated in multiple pathophysiological conditions, such as reducing plaque formation of Aβ peptide and inhibiting SARS-CoV-2 infection. Their mode of action has been hypothesized to be membrane reorganization by the unsaturated acyl chains, leading to the modulation of lipid-protein cross-talk. However, the lack of molecular details led us to evaluate the molecular effect of omega-6 (linolenic acid) and omega-9 (oleic acid) fatty acids on membrane organization using a consolidated approach of fluorescence spectroscopy and all-atom molecular dynamics simulation.
View Article and Find Full Text PDFVet Ital
March 2025
Department of Internal Medicine, Faculty of Veterinary Medicine, Harran University, Şanlıurfa, Turkey.
Despite aggressive treatment, canine parvovirus (CPV) enteritis remains a major cause of morbidity and mortality in puppies. Identifying reliable biomarkers of CPV enteritis is important for determining severity, length of hospital stay, and predicting clinical outcomes. This the first study that aims to emphasize the relevance of the manuscript.
View Article and Find Full Text PDFPlant Physiol Biochem
February 2025
Instituto de la Grasa, Ctra Utrera Km 1, Building 46, 41013, Sevilla, Spain. Electronic address:
Wax esters (WEs) are aliphatic esters of very-long-chain fatty acids and fatty alcohols that contribute to the lipid coatings of many plant organs. In the case of sunflower seeds, these compounds accumulate especially in the seed hull and are synthesized by the action of wax synthase (WS) enzymes through the esterification of acyl-CoA derivatives with very-long-chain fatty alcohols produced by fatty acyl reductases. Here, genes encoding 15 WSs were identified in the sunflower genome, of which 3 are expressed appreciably in the seed during the period of WE accumulation: HaWS6, HaWS8, and HaWS11.
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