A PHP Error was encountered

Severity: Warning

Message: file_get_contents(https://...@pubfacts.com&api_key=b8daa3ad693db53b1410957c26c9a51b4908&a=1): Failed to open stream: HTTP request failed! HTTP/1.1 429 Too Many Requests

Filename: helpers/my_audit_helper.php

Line Number: 176

Backtrace:

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 176
Function: file_get_contents

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 250
Function: simplexml_load_file_from_url

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 1034
Function: getPubMedXML

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 3152
Function: GetPubMedArticleOutput_2016

File: /var/www/html/application/controllers/Detail.php
Line: 575
Function: pubMedSearch_Global

File: /var/www/html/application/controllers/Detail.php
Line: 489
Function: pubMedGetRelatedKeyword

File: /var/www/html/index.php
Line: 316
Function: require_once

The Complete Genome Sequence of Hyperthermophile DSM 6724™ Reveals a Specialized Carbohydrate Fermentor. | LitMetric

The Complete Genome Sequence of Hyperthermophile DSM 6724™ Reveals a Specialized Carbohydrate Fermentor.

Front Microbiol

DOE Great Lakes Bioenergy Research Center, University of Wisconsin-MadisonMadison, WI, USA; Varigen Biosciences CorporationMadison, WI, USA.

Published: December 2016

Here we report the complete genome sequence of the chemoorganotrophic, extremely thermophilic bacterium, , which is a Gram negative, strictly anaerobic bacterium. and together form the phylum. The two genomes are highly syntenic, and both are distantly related to spp. is able to grow on a wide variety of polysaccharide substrates due to significant genomic commitment to glycosyl hydrolases, 16 of which were cloned and expressed in our study. The GH5, GH10, and GH42 enzymes characterized in this study suggest that can utilize most plant-based polysaccharides except crystalline cellulose. The DNA polymerase I enzyme was also expressed and characterized. The pure enzyme showed improved amplification of long PCR targets compared to Taq polymerase. The genome contains a full complement of DNA modifying enzymes, and an unusually high copy number (4) of a new, ancestral family of polB type nucleotidyltransferases designated as MNT (minimal nucleotidyltransferases). Considering its optimal growth at 72°C, has an anomalously low G+C content of 39.9% that may account for the presence of reverse gyrase, usually associated with hyperthermophiles.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5167688PMC
http://dx.doi.org/10.3389/fmicb.2016.01979DOI Listing

Publication Analysis

Top Keywords

complete genome
8
genome sequence
8
sequence hyperthermophile
4
hyperthermophile dsm
4
dsm 6724™
4
6724™ reveals
4
reveals specialized
4
specialized carbohydrate
4
carbohydrate fermentor
4
fermentor report
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!