AI Article Synopsis

  • Viral proteases, like protease 3C from coxsackievirus B3, play a crucial role in assembling viral components for proliferation and are associated with viral myocarditis.
  • The study details the process of expressing, purifying, crystallizing, and analyzing the protease 3C using X-ray diffraction techniques.
  • Successful production of polycrystalline protein suitable for X-ray measurements led to identifying a new polymorph with specific unit-cell parameters, marking progress toward fully understanding the protease's structure.

Article Abstract

Viral proteases are proteolytic enzymes that orchestrate the assembly of viral components during the viral life cycle and proliferation. Here, the expression, purification, crystallization and preliminary X-ray diffraction analysis are presented of protease 3C, the main protease of an emerging enterovirus, coxsackievirus B3, that is responsible for many cases of viral myocarditis. Polycrystalline protein precipitates suitable for X-ray powder diffraction (XRPD) measurements were produced in the presence of 22-28%(w/v) PEG 4000, 0.1 M Tris-HCl, 0.2 M MgCl in a pH range from 7.0 to 8.5. A polymorph of monoclinic symmetry (space group C2, unit-cell parameters a = 77.9, b = 65.7, c = 40.6 Å, β = 115.9°) was identified via XRPD. These results are the first step towards the complete structural determination of the molecule via XRPD and a parallel demonstration of the accuracy of the method.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5137464PMC
http://dx.doi.org/10.1107/S2053230X16018513DOI Listing

Publication Analysis

Top Keywords

expression purification
8
purification crystallization
8
crystallization preliminary
8
coxsackievirus protease
4
protease expression
4
preliminary structural
4
structural insights
4
viral
4
insights viral
4
viral proteases
4

Similar Publications

Exploring Tetraselmis chui microbiomes-functional metagenomics for novel catalases and superoxide dismutases.

Appl Microbiol Biotechnol

January 2025

Department of Microbiology and Biotechnology, Institute of Plant Science and Microbiology, University of Hamburg, Ohnhorststr.18, 22609, Hamburg, Germany.

The focus on microalgae for applications in several fields, e.g. resources for biofuel, the food industry, cosmetics, nutraceuticals, biotechnology, and healthcare, has gained increasing attention over the last decades.

View Article and Find Full Text PDF

Major depressive disorder (MDD) is a common mood condition affecting multiple brain regions and cell types. Changes in astrocyte function contribute to depressive-like behaviors. However, while neuronal mechanisms driving MDD have been studied in some detail, molecular mechanisms by which astrocytes promote depression have not been extensively explored.

View Article and Find Full Text PDF

Chondroitin sulfate (CS) is a structurally complex anionic polysaccharide widely used in medical, cosmetic and food applications. Enzymatic catalysis is an important strategy for synthesizing CS with uniform chain lengths and well-defined structures. However, the industrial application of glycosyltransferases is hindered by limitations such as low expression yields, poor stability, and challenges in reuse.

View Article and Find Full Text PDF

Voltage-dependent anion channel 1 (VDAC1) is a key protein in cellular metabolism and apoptosis. Here, we present a protocol to express and purify milligram amounts of recombinant VDAC1 in Escherichia coli. We detail steps for a fluorescence polarization-based high-throughput screening assay using NADH displacement, along with procedures for thermostability, fluorescence polarization, and X-ray crystallography.

View Article and Find Full Text PDF

Complex transcription regulation of acidic chitinase suggests fine-tuning of digestive processes in Drosera binata.

Planta

January 2025

Institute of Plant Genetics and Biotechnology, Plant Science and Biodiversity Center, Slovak Academy of Sciences, Akademicka 2, P. O. Box 39A, 950 07, Nitra, Slovak Republic.

DbChitI-3, Drosera binata's acidic chitinase, peaks at pH 2.5 from 15 °C to 30 °C. Gene expression is stimulated by polysaccharides and suppressed by monosaccharide digestion, implying a feedback loop in its transcriptional regulation.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!