Several species were isolated from rice field soils, and 16S rRNA gene sequence analysis showed that was the most abundant. A strain named BC1 showed antifungal activity against . Bacteriophages infecting strain BC1 were isolated from the same soil sample. The isolated phage PK16 had an icosahedral head of 100 ± 5 nm and tail of 200 ± 5 nm, indicating that it belonged to the family . Analysis of the complete linear dsDNA genome revealed a 158,127-bp genome with G + C content of 39.9% comprising 235 open reading frames as well as 19 tRNA genes (including 1 pseudogene). Blastp analysis showed that the proteins encoded by the PK16 genome had the closest hits to proteins of seven different bacteriophages. A neighbor-joining phylogenetic tree based on the major capsid protein showed a robust clustering of phage PK16 with phage JBP901 and BCP8-2 isolated from Korean fermented food.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5117869PMC
http://dx.doi.org/10.5423/PPJ.NT.07.2016.0153DOI Listing

Publication Analysis

Top Keywords

phage pk16
8
isolation characterization
4
characterization bacteriophage
4
bacteriophage preying
4
preying antifungal
4
antifungal bacterium
4
bacterium species
4
isolated
4
species isolated
4
isolated rice
4

Similar Publications

Several species were isolated from rice field soils, and 16S rRNA gene sequence analysis showed that was the most abundant. A strain named BC1 showed antifungal activity against . Bacteriophages infecting strain BC1 were isolated from the same soil sample.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!