Data assimilation (DA) is a fundamental computational technique that integrates numerical simulation models and observation data on the basis of Bayesian statistics. Originally developed for meteorology, especially weather forecasting, DA is now an accepted technique in various scientific fields. One key issue that remains controversial is the implementation of DA in massive simulation models under the constraints of limited computation time and resources. In this paper, we propose an adjoint-based DA method for massive autonomous models that produces optimum estimates and their uncertainties within reasonable computation time and resource constraints. The uncertainties are given as several diagonal elements of an inverse Hessian matrix, which is the covariance matrix of a normal distribution that approximates the target posterior probability density function in the neighborhood of the optimum. Conventional algorithms for deriving the inverse Hessian matrix require O(CN^{2}+N^{3}) computations and O(N^{2}) memory, where N is the number of degrees of freedom of a given autonomous system and C is the number of computations needed to simulate time series of suitable length. The proposed method using a second-order adjoint method allows us to directly evaluate the diagonal elements of the inverse Hessian matrix without computing all of its elements. This drastically reduces the number of computations to O(C) and the amount of memory to O(N) for each diagonal element. The proposed method is validated through numerical tests using a massive two-dimensional Kobayashi phase-field model. We confirm that the proposed method correctly reproduces the parameter and initial state assumed in advance, and successfully evaluates the uncertainty of the parameter. Such information regarding uncertainty is valuable, as it can be used to optimize the design of experiments.
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http://dx.doi.org/10.1103/PhysRevE.94.043307 | DOI Listing |
Comput Vis ECCV
November 2024
University of Minnesota, Minneapolis.
Diffusion models have emerged as powerful generative techniques for solving inverse problems. Despite their success in a variety of inverse problems in imaging, these models require many steps to converge, leading to slow inference time. Recently, there has been a trend in diffusion models for employing sophisticated noise schedules that involve more frequent iterations of timesteps at lower noise levels, thereby improving image generation and convergence speed.
View Article and Find Full Text PDFThe stiffness of cells and of their nuclei is a biomarker of several pathological conditions. Current measurement methods rely on invasive physical probes that yield one or two stiffness values for the whole cell. However, the internal distribution of cells is heterogeneous.
View Article and Find Full Text PDFCells
September 2024
Department of Gastroenterology, Justus Liebig University, 35392 Giessen, Germany.
Chemphyschem
December 2024
Physikalisch-Chemisches Institut, Justus-Liebig-Universität Gießen, Heinrich-Buff-Ring 17, Gießen, D-35392, Germany.
The formation of highly reactive singlet oxygen from alkaline superoxides presents an important reactivity of this component class. Investigations of the reaction paths such as disproportionation of LiO and NaO have been presented. Furthermore, the dissociation of these superoxide systems have been discussed as an alternative reaction channel that also allows the formation of singlet oxygen.
View Article and Find Full Text PDFMany statistical models have been proposed in the literature for the analysis of longitudinal data. One may propose to model two or more correlated longitudinal processes simultaneously, with a goal of understanding their association over time. Joint modeling is then required to carefully study the association structure among the outcomes as well as drawing joint inferences about the different outcomes.
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