Inferring propagation paths for sparsely observed perturbations on complex networks.

Sci Adv

Departament d'Enginyeria Química, Universitat Rovira i Virgili, Tarragona 43007, Catalonia, Spain.; Institució Catalana de Recerca i Estudis Avançats (ICREA), Barcelona 08010, Catalonia, Spain.

Published: October 2016

In a complex system, perturbations propagate by following paths on the network of interactions among the system's units. In contrast to what happens with the spreading of epidemics, observations of general perturbations are often very sparse in time (there is a single observation of the perturbed system) and in "space" (only a few perturbed and unperturbed units are observed). A major challenge in many areas, from biology to the social sciences, is to infer the propagation paths from observations of the effects of perturbation under these sparsity conditions. We address this problem and show that it is possible to go beyond the usual approach of using the shortest paths connecting the known perturbed nodes. Specifically, we show that a simple and general probabilistic model, which we solved using belief propagation, provides fast and accurate estimates of the probabilities of nodes being perturbed.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5088640PMC
http://dx.doi.org/10.1126/sciadv.1501638DOI Listing

Publication Analysis

Top Keywords

propagation paths
8
inferring propagation
4
paths
4
paths sparsely
4
sparsely observed
4
observed perturbations
4
perturbations complex
4
complex networks
4
networks complex
4
complex system
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!