Background: The rice receptor kinase XA21 confers robust resistance to the bacterial pathogen pv. (). We previously reported that XA21 is cleaved in transgenic plants overexpressing XA21 with a GFP tag (-XA21-GFP) and that the released C-terminal domain is localized to the nucleus. XA21 carries a predicted nuclear localization sequence (NLS) that directs the C-terminal domain to the nucleus in transient assays, whereas alanine substitutions in the NLS disrupt the nuclear localization.
Methods: To determine if the predicted NLS is required for XA21-mediated immunity , we generated transgenic plants overexpressing an XA21 variant carrying the NLS with the same alanine substitutions (-XA21nls-GFP).
Results: XA21nls-GFP plants displayed slightly longer lesion lengths, higher bacterial populations after inoculation and lower levels of reactive oxygen species production compared with the XA21-GFP control plants. However, the XA21nls-GFP plants express lower levels of protein than that observed in XA21-GFP.
Discussion: These results demonstrate that the predicted NLS is not required for XA21-mediated immunity.
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http://dx.doi.org/10.7717/peerj.2507 | DOI Listing |
Nat Commun
January 2025
Bioinformatics and computational systems biology of cancer, Institut Curie, Inserm U900, PSL Research University, Paris, France.
Immunotherapy is improving the survival of patients with metastatic non-small cell lung cancer (NSCLC), yet reliable biomarkers are needed to identify responders prospectively and optimize patient care. In this study, we explore the benefits of multimodal approaches to predict immunotherapy outcome using multiple machine learning algorithms and integration strategies. We analyze baseline multimodal data from a cohort of 317 metastatic NSCLC patients treated with first-line immunotherapy, including positron emission tomography images, digitized pathological slides, bulk transcriptomic profiles, and clinical information.
View Article and Find Full Text PDFJ Prev Alzheimers Dis
January 2025
Department of Neuropsychiatry, Seoul National University Hospital, Seoul, 03080, Republic of Korea; Department of Psychiatry, Seoul National University College of Medicine, Seoul, 03080, Republic of Korea; Institute of Human Behavioral Medicine, Medical Research Center Seoul National University, Seoul, 03080, Republic of Korea; Interdisciplinary Program of Cognitive Science, Seoul National University College of Humanities, Seoul, 08826, Republic of Korea. Electronic address:
Importance: The neuropathological links underlying the association between changes in liver function and AD have not yet been clearly elucidated.
Objective: We aimed to examine the relationship between liver function markers and longitudinal changes in Alzheimer's disease (AD) core pathologies.
Design: Data from the Korean Brain Aging Study for the Early Diagnosis and Prediction of Alzheimer's Disease, a longitudinal cohort study initiated in 2014, were utilized.
Open Heart
January 2025
Department of Cardiology, University Hospital Basel, Basel, Switzerland.
Background: The majority of functional ischemia tests in patients with suspected chronic coronary syndromes (CCS) yield normal results. Implementing gatekeepers for patient preselection, such as pretest probability (PTP) and/or coronary artery calcium score (CACS), could reduce the number of normal scan results, radiation exposure and costs. However, the efficacy and safety of these approaches remain unclear.
View Article and Find Full Text PDFComput Methods Programs Biomed
January 2025
Department of Radiology and Biomedical Research Imaging Center (BRIC), University of North Carolina at Chapel Hill, Chapel Hill, USA. Electronic address:
Background And Objective: Deformable registration of multimodal brain magnetic resonance images presents significant challenges, primarily due to substantial structural variations between subjects and pronounced differences in appearance across imaging modalities.
Methods: Here, we propose to symmetrically register images from two modalities based on appearance residuals from one modality to another. Computed with simple subtraction between modalities, the appearance residuals enhance structural details and form a common representation for simplifying multimodal deformable registration.
NPJ Precis Oncol
January 2025
Tissue Image Analytics Centre, Department of Computer Science, University of Warwick, Coventry, United Kingdom.
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