Inbreeding depression, the reduction of fitness caused by inbreeding, is a nearly universal phenomenon that depends on past mutation, selection, and genetic drift. Recent estimates suggest that its impact on individual fitness is even greater than previously thought. Genomic information is contributing to its detection and can enlighten important aspects of its genetic architecture. In natural populations, purging and genetic rescue mitigate fitness decline during inbreeding periods, and might be critical to population survival, thus, both mechanisms should be considered when assessing extinction risks. However, deliberate purging and genetic rescue involve considerable risk in the short and medium term, so that neither appears to be a panacea against high inbreeding depression.
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http://dx.doi.org/10.1016/j.tree.2016.09.005 | DOI Listing |
Physiol Mol Biol Plants
December 2024
ICAR-Central Potato Research Institute, Bemloi, Shimla, Himachal Pradesh 171001 India.
Following the identification of the self-compatibility gene () in diploid potatoes two decades ago, the breeding of inbred based diploid hybrid potatoes made its way. Tetraploid potatoes have a long history of cultivation through domestication and selection. Tetrasomic inheritance, heterozygosity and clonal propagation complicate genetic studies, resulting in a low genetic gain in potato breeding.
View Article and Find Full Text PDFFront Plant Sci
December 2024
Department of Ecology and Evolutionary Biology, University of Kansas, Lawrence, KS, United States.
Ecol Lett
December 2024
Department of Biology, University of Rochester, Rochester, New York, USA.
Isolation caused by anthropogenic habitat fragmentation can destabilize populations. Populations relying on the inflow of immigrants can face reduced fitness due to inbreeding depression as fewer new individuals arrive. Empirical studies of the demographic consequences of isolation are critical to understand how populations persist through changing conditions.
View Article and Find Full Text PDFMol Ecol
December 2024
Ecology and Evolutionary Biology Group, School of Biological Sciences, University of Auckland, Auckland, Aotearoa, New Zealand.
The field of conservation genomics is becoming increasingly interested in whether, and how, structural variant (SV) genotype information can be leveraged in the management of threatened species. The functional consequences of SVs are more complex than for single nucleotide polymorphisms (SNPs), as SVs typically impact a larger proportion of the genome due to their size and thus may be more likely to contribute to load. While the impacts of SV-specific genetic load may be less consequential for large populations, the interplay between weakened selection and stochastic processes means that smaller populations, such as those of the threatened Aotearoa hihi/New Zealand stitchbird (Notiomystis cincta), may harbour a high SV load.
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January 2025
School of Ecology, Sun Yat-Sen University, Shenzhen, China.
To ensure the success of genetic rescue, we must minimise the potential negative effects of outbreeding depression that may arise from selecting source populations. The difficulty in assessing the likelihood of outbreeding depression has hindered its consideration in endangered species conservation. However, genomic research offers feasible indications.
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