The ITS-based phylogeny of fungi associated with tarballs.

Mar Pollut Bull

Biological Oceanography Division, CSIR-National Institute Oceanography, Dona Paula 403004, Goa, India; CSIR-National Institute of Oceanography Regional Centre, 176, Lawsons Bay Colony, Visakhapatnam 530017, Andhra Pradesh, India. Electronic address:

Published: December 2016

Tarballs, the remnants of crude oil which change into semi-solid phase due to various weathering processes in the sea, are rich in hydrocarbons, including toxic and almost non-degradable hydrocarbons. Certain microorganisms such as fungi are known to utilize hydrocarbons present in tarballs as sole source of carbon for nutrition. Previous studies have reported 53 fungal taxa associated with tarballs. There is apparently no gene sequence-data available for the published taxa so as to verify the fungal identification using modern taxonomic tools. The objective of the present study is to isolate fungi from tarballs collected from Candolim beach in Goa, India and investigate their phylogenetic diversity based on 5.8S rRNA gene and the flanking internal transcribed spacer regions (ITS) sequence analysis. In the ITS-based NJ tree, eight tarball-associated fungal isolates clustered with 3 clades of Dothideomycetes and 2 clades of Saccharomycetes. To the best of our knowledge, this is the first study that has employed ITS-based phylogeny to characterize the fungal diversity associated with tarballs. Further studies are warranted to investigate the role of the tarball-associated fungi in degradation of recalcitrant hydrocarbons present in tarballs and the role of tarballs as carriers of human pathogenic fungi.

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.marpolbul.2016.09.052DOI Listing

Publication Analysis

Top Keywords

associated tarballs
12
its-based phylogeny
8
tarballs
8
hydrocarbons tarballs
8
fungi
5
phylogeny fungi
4
fungi associated
4
tarballs tarballs
4
tarballs remnants
4
remnants crude
4

Similar Publications

This study explores the fungal diversity associated with tarballs, weathered crude oil deposits, on Goa's tourist beaches. Despite tarball pollution being a longstanding issue in Goa state in India, comprehensive studies on associated fungi are scarce. Our research based on amplicon sequence analysis of fungal ITS region fills this gap, revealing a dominance of Aspergillus, particularly Aspergillus penicillioides, associated with tarballs from Vagator and Morjim beaches.

View Article and Find Full Text PDF

Unlabelled: A consortium of bacteria capable of decomposing oily hydrocarbons was isolated from tarballs on the beaches of Terengganu, Malaysia, and classified as , , and . The Taguchi design was used to optimize the biodegradation of diesel using these bacteria as a consortium. The highest biodegradation of diesel-oil in the experimental tests was 93.

View Article and Find Full Text PDF
Article Synopsis
  • Tarballs, semi-solid blobs of crude oil, are formed in marine environments, and their microbial degradation is not well understood.
  • In a study conducted at Betul beach in Goa, India, 38 bacteria associated with tarballs were screened for their ability to degrade crude oil, leading to the selection of four strains for bacterial consortia preparation.
  • The most effective bacterial consortium, consisting of strains Betul-14, Betul-M, and Betul-O, achieved significant degradation of -alkanes and polycyclic aromatic hydrocarbons, with up to 97.78% and 61.98% reduction, respectively, within 45 days, highlighting the potential for using these bacteria in bioremediation efforts.
View Article and Find Full Text PDF

The beaches of Goa state in India are frequently polluted with tarballs, specifically during pre-monsoon and monsoon seasons. Tarballs contain hydrocarbons, including polycyclic aromatic hydrocarbons, which pose significant environmental risks. Microbes associated with tarballs reportedly possess capabilities to degrade toxic hydrocarbons present in tarballs.

View Article and Find Full Text PDF

Tarballs are semisolid blobs of crude oil, normally formed due to weathering of crude-oil in the sea after any kind of oil spills. Microorganisms are believed to thrive on hydrocarbon-rich tarballs and possibly assist in biodegradation. The taxonomy of ecologically and economically important tarball-associated microbes, however, needs improvement as DNA-based identification and phylogenetic characterization have been scarcely incorporated into it.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!