Comparative study on stabilization mechanism of monomeric cytochrome c from deep-sea piezophilic Shewanella violacea.

Monomeric cytochrome c from deep-sea piezophilic Shewanella violacea (SVcytc) was stable against heat and denaturant compared with the homologous protein from shallow-sea piezo-sensitive Shewanella livingstonensis (SLcytc). Here, the SVcytc crystal structure revealed that the Lys-50 side chain on the flexible loop formed a hydrogen bond with heme whereas that of corresponding hydrophobic Leu-50 could not form such a bond in SLcytc, which appeared to be one of possible factors responsible for the difference in stability between the two proteins. This structural insight was confirmed by a reciprocal mutagenesis study on the thermal stability of these two proteins. As SVcytc was isolated from a deep-sea piezophilic bacterium, the present comparative study indicates that adaptation of monomeric SVcytc to high pressure environments results in stabilization against heat.