We study the modifications induced in the behavior of the quorum percolation model on neural networks with Gaussian in-degree by taking into account an uncorrelated Gaussian thresholds variability. We derive a mean-field approach and show its relevance by carrying out explicit Monte Carlo simulations. It turns out that such a disorder shifts the position of the percolation transition, impacts the size of the giant cluster, and can even destroy the transition. Moreover, we highlight the occurrence of disorder independent fixed points above the quorum critical value. The mean-field approach enables us to interpret these effects in terms of activation probability. A finite-size analysis enables us to show that the order parameter is weakly self-averaging with an exponent independent on the thresholds disorder. Last, we show that the effects of the thresholds and connectivity disorders cannot be easily discriminated from the measured averaged physical quantities.
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http://dx.doi.org/10.1103/PhysRevE.94.012316 | DOI Listing |
Nat Commun
January 2024
Institute of Earth Sciences, University of Lausanne, CH-1015, Lausanne, Switzerland.
Biological tissues, sediments, or engineered systems are spatially structured media with a tortuous and porous structure that host the flow of fluids. Such complex environments can influence the spatial and temporal colonization patterns of bacteria by controlling the transport of individual bacterial cells, the availability of resources, and the distribution of chemical signals for communication. Yet, due to the multi-scale structure of these complex systems, it is hard to assess how different biotic and abiotic properties work together to control the accumulation of bacterial biomass.
View Article and Find Full Text PDFJ Colloid Interface Sci
October 2020
Westfälische Wilhelms Universität Münster. IBBP, Laboratory of Nanobiotechnology, Schlossplatz 8, Münster 48143, Germany; School of Food Science and Nutrition. University of Leeds, Leeds LS2 9JT, United Kingdom. Electronic address:
In our efforts to improve the quality and stability of chitosan nanoparticles (NPs), we describe here a new type of chitosan NPs dually crosslinked with genipin and sodium tripolyphosphate (TPP) that display quorum quenching activity. These NPs were created using a simplified and robust procedure that resulted in improved physicochemical properties and enhanced stability. This procedure involves the covalent crosslinking of chitosan with genipin, followed by the formation of chitosan NPs by ionic gelation with TPP.
View Article and Find Full Text PDFNature
July 2019
Department of Bioengineering, Stanford University, Stanford, CA, USA.
The biophysical relationships between sensors and actuators have been fundamental to the development of complex life forms. Swimming organisms generate abundant flows that persist in aquatic environments, and responding promptly to external stimuli is key to survival. Here we present the discovery of 'hydrodynamic trigger waves' in cellular communities of the protist Spirostomum ambiguum that propagate-in a manner similar to a chain reaction-hundreds of times faster than their swimming speed.
View Article and Find Full Text PDFPhys Rev E
April 2019
Department of Physics and Astronomy, University of Southern California, Los Angeles, CA 90089, USA.
Bacteria communicate with each other to coordinate macroscale behaviors including pathogenesis, biofilm formation, and antibiotic production. Empirical evidence suggests that bacteria are capable of communicating at length scales far exceeding the size of individual cells. Several mechanisms of signal interference have been observed in nature, and how interference influences macroscale activity within microbial populations is unclear.
View Article and Find Full Text PDFPhys Rev E
July 2016
Laboratoire Matière et Systèmes Complexes, UMR 7057 CNRS, Université Denis Diderot-Paris 7, 10 rue A. Domon et L. Duquet, 75013 Paris Cedex, France.
We study the modifications induced in the behavior of the quorum percolation model on neural networks with Gaussian in-degree by taking into account an uncorrelated Gaussian thresholds variability. We derive a mean-field approach and show its relevance by carrying out explicit Monte Carlo simulations. It turns out that such a disorder shifts the position of the percolation transition, impacts the size of the giant cluster, and can even destroy the transition.
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