Super-resolution microscopy with phase masks is a promising technique for 3D imaging and tracking. Due to the complexity of the resultant point spread functions, generalized recovery algorithms are still missing. We introduce a 3D super-resolution recovery algorithm that works for a variety of phase masks generating 3D point spread functions. A fast deconvolution process generates initial guesses, which are further refined by least squares fitting. Overfitting is suppressed using a machine learning determined threshold. Preliminary results on experimental data show that our algorithm can be used to super-localize 3D adsorption events within a porous polymer film and is useful for evaluating potential phase masks. Finally, we demonstrate that parallel computation on graphics processing units can reduce the processing time required for 3D recovery. Simulations reveal that, through desktop parallelization, the ultimate limit of real-time processing is possible. Our program is the first open source recovery program for generalized 3D recovery using rotating point spread functions.
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http://dx.doi.org/10.1038/srep30826 | DOI Listing |
Front Microbiol
December 2024
College of Pharmacy, Dongguk University, Seoul, Republic of Korea.
Understanding the early interactions between severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and human airway epithelial cells is essential for unraveling viral replication and spread mechanisms. In this study, we investigated the early dynamics of airway epithelial cells during SARS-CoV-2 infection using well-differentiated human nasal and tracheal epithelial cell cultures by incorporating three publicly available single-cell RNA sequencing datasets. We identified a previously uncharacterized cell population, termed virus-rich intermediate (VRI) cells, representing an intermediate differentiation stage between basal and ciliated cells.
View Article and Find Full Text PDFJ Water Health
December 2024
Department of Genetic Engineering and Biotechnology, Jagannath University, Dhaka 1100, Bangladesh.
is a pathogenic bacterium widely distributed in the environment, with increasing concerns about multidrug-resistant (MDR) strains in riverine systems. In this study, we assessed the antibiotic resistance of 50 isolates from surface water samples collected at seven distinct sites along the Buriganga River. Antibiotic sensitivity was tested using the Kirby-Bauer Disk Diffusion method.
View Article and Find Full Text PDFSci Rep
December 2024
Department of Mathematics, Faculty of Science, The Hashemite University, P.O.Box 330127, Zarqa, 13133, Jordan.
In this study, we developed a Caputo-Fractional Chlamydia pandemic model to describe the disease's spread. We demonstrated the model's positivity and boundedness, ensuring biological relevance. The existence and uniqueness of the model's solution were established, and we investigated the stability of the α-fractional order model.
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December 2024
College of Safety Science and Engineering, Liaoning Technical University, 47 Zhonghua Road, Xihe District, Fuxin City, 123000, Liaoning Province, China.
Based on the engineering example of Linsheng coal mine, this paper uses TF1M3D computer simulation platform to systematically analyze the process of smoke flow spreading and air flow disorder disaster from the perspective of the whole mine network, and puts forward corresponding plans and measures. A small scale similar experiment was carried out to study the updraft flow fire in the mine. Through the analysis of the collected experimental data, the variation law of the air volume of the fire source in the main air path, side branch road and total air path with different air volume and the variation characteristics of the temperature at the monitoring point with time were obtained under different air volume conditions, and the critical air volume was fitted as 1.
View Article and Find Full Text PDFSci Rep
December 2024
State Key Laboratory of Media Convergence and Communication, Communication University of China, Beijing, 100024, China.
The proliferation of multi-platform network information has expanded communication channels for users, enabling the integration and dissemination of information across both Social Networking Services (SNS)-type app and Instant Message (IM)-type app. With the intensification of convergent communication, some users in the two types of apps show active alternation in spreading information to each other's platforms. The study of the evolution trend of information in different platforms is of great practical significance for the mastery of the communication law.
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