Severity: Warning
Message: file_get_contents(https://...@pubfacts.com&api_key=b8daa3ad693db53b1410957c26c9a51b4908&a=1): Failed to open stream: HTTP request failed! HTTP/1.1 429 Too Many Requests
Filename: helpers/my_audit_helper.php
Line Number: 176
Backtrace:
File: /var/www/html/application/helpers/my_audit_helper.php
Line: 176
Function: file_get_contents
File: /var/www/html/application/helpers/my_audit_helper.php
Line: 250
Function: simplexml_load_file_from_url
File: /var/www/html/application/helpers/my_audit_helper.php
Line: 1034
Function: getPubMedXML
File: /var/www/html/application/helpers/my_audit_helper.php
Line: 3152
Function: GetPubMedArticleOutput_2016
File: /var/www/html/application/controllers/Detail.php
Line: 575
Function: pubMedSearch_Global
File: /var/www/html/application/controllers/Detail.php
Line: 489
Function: pubMedGetRelatedKeyword
File: /var/www/html/index.php
Line: 316
Function: require_once
CMIRS (composite method for implicit representation of solvent) is a relatively new implicit solvation model that adds terms representing solute-solvent dispersion, Pauli repulsion, and hydrogen bonding to a continuum treatment of electrostatics. A small error in the original implementation of the dispersion term, but one that can modify dispersion energies by up to 8 kcal/mol in some cases, necessitates refitting the parameters in the model, which we do here. We refer to the modified implementation and parameter set as CMIRS v. 1.1. While the dispersion energies change in nontrivial ways, an increase in the attractive dispersion term in the new implementation is largely offset by an increase in the Pauli repulsion during the fitting process, such that overall statistical errors are virtually unchanged with respect to v. 1.0 of the model, for a large database of experimental solvation free energies for molecules and ions. Overall, we obtain mean unsigned errors of <0.7 kcal/mol when the solvent is cyclohexane or benzene, <1.5 kcal/mol for water, and <2.8 kcal/mol for dimethyl sulfoxide and acetonitrile, despite using no more than five empirical parameters per solvent. For the important but difficult case of ionic solutes in water, mean unsigned errors are <2.9 kcal/mol.
Download full-text PDF |
Source |
---|---|
http://dx.doi.org/10.1021/acs.jctc.6b00644 | DOI Listing |
Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!