Physical properties of sediments are commonly used to define subsurface lithofacies and these same physical properties influence subsurface microbial communities. This suggests an (unexploited) opportunity to use the spatial distribution of facies to predict spatial variation in biogeochemically relevant microbial attributes. Here, we characterize three biogeochemical facies-oxidized, reduced, and transition-within one lithofacies and elucidate relationships among facies features and microbial community biomass, richness, and composition. Consistent with previous observations of biogeochemical hotspots at environmental transition zones, we find elevated biomass within a biogeochemical facies that occurred at the transition between oxidized and reduced biogeochemical facies. Microbial richness-the number of microbial taxa-was lower within the reduced facies and was well-explained by a combination of pH and mineralogy. Null modeling revealed that microbial community composition was influenced by ecological selection imposed by redox state and mineralogy, possibly due to effects on nutrient availability or transport. As an illustrative case, we predict microbial biomass concentration across a three-dimensional spatial domain by coupling the spatial distribution of subsurface biogeochemical facies with biomass-facies relationships revealed here. We expect that merging such an approach with hydro-biogeochemical models will provide important constraints on simulated dynamics, thereby reducing uncertainty in model predictions.
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http://dx.doi.org/10.1038/srep30553 | DOI Listing |
Carbon Capture Sci Technol
December 2024
Department of Engineering, King's College London, WC2R 2LS, UK.
Meeting the needs of a growing population calls for a change from linear production systems that exacerbate the depletion of finite natural resources and the emission of environmental pollutants. These linear production systems have resulted in the human-driven perturbation of the Earth's natural biogeochemical cycles and the transgression of environmentally safe operating limits. One solution that can help alleviate the environmental issues associated both with resource stress and harmful emissions is resource recovery from waste.
View Article and Find Full Text PDFmSystems
December 2024
River Ecosystems Laboratory, Alpine and Polar Environmental Research Center, Ecole Polytechnique Fédérale de Lausanne (EPFL), Sion, Switzerland.
Unlabelled: Glacier-fed streams are permanently cold, ultra-oligotrophic, and physically unstable environments, yet microbial life thrives in benthic biofilm communities. Within biofilms, microorganisms rely on secondary metabolites for communication and competition. However, the diversity and genetic potential of secondary metabolites in glacier-fed stream biofilms remain poorly understood.
View Article and Find Full Text PDFRapid Commun Mass Spectrom
March 2025
School of Geography, Earth and Environmental Sciences, University of Birmingham, Birmingham, UK.
Rationale: The analysis of natural abundance isotopes in biogenic NO molecules provides valuable insights into the nature of their precursors and their role in biogeochemical cycles. However, current methodologies (for example, the isotopocule map approach) face limitations, as they only enable the estimation of combined contributions from multiple processes at once rather than discriminating individual sources. This study aimed to overcome this challenge by developing a novel methodology for the partitioning of NO sources in soil, combining natural abundance isotopes and the use of a N tracer (N Gas Flux method) in parallel incubations.
View Article and Find Full Text PDFEnviron Microbiol
December 2024
CNRS, Sorbonne Université, UMR 7621, Laboratoire d'Océanographie Microbienne (LOMIC), Banyuls sur mer, France.
Nat Commun
November 2024
Department of Soil Science, "Luiz de Queiroz" College of Agriculture/University of São Paulo (ESALQ/USP), Av. Pádua Dias 11, Piracicaba, São Paulo, Brazil.
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