Glyco-seek: Ultrasensitive Detection of Protein-Specific Glycosylation by Proximity Ligation Polymerase Chain Reaction.

J Am Chem Soc

Departments of †Chemistry, ‡Molecular and Cell Biology, and §Molecular Environmental Biology, University of California, Berkeley, California 94720, United States.

Published: August 2016

AI Article Synopsis

  • A new method called "Glyco-seek" allows for the non-destructive analysis of O-GlcNAcylated proteins using a combination of labeling, proximity ligation, and quantitative PCR.
  • This technique offers extremely high sensitivity, enabling the detection of very low amounts (attomoles) of glycoproteins in cellular samples.
  • Glyco-seek can operate alongside traditional assays to measure both O-GlcNAcylation levels and total protein amounts, providing a comprehensive view of protein modifications without the need for complex isolation processes.

Article Abstract

We report a non-destructive biochemical technique, termed "Glyco-seek", for analysis of O-GlcNAcylated proteins. Glyco-seek combines chemoenzymatic labeling, proximity ligation, and quantitative polymerase chain reaction to detect O-GlcNAcylated proteins with ultrahigh sensitivity. Our glycan-specific assay can be paired with traditional proximity ligation assays to simultaneously determine the change in total protein levels. We show that Glyco-seek detects attomoles of glycoproteins of interest from cell lysates, with sensitivity several orders of magnitude higher than that of current techniques. We used the method to directly assay the O-GlcNAcylation status of a low-abundance transcription factor from cell lysates without need for isolation or enrichment.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5327792PMC
http://dx.doi.org/10.1021/jacs.6b03861DOI Listing

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