Current-voltage characteristics of seven-helix proteins from a cubic array of amino acids.

Phys Rev E

Dipartimento di Matematica e Fisica, "Ennio de Giorgi, " Università del Salento, via Monteroni, I-73100 Lecce, Italy.

Published: June 2016

The electrical properties of a set of seven-helix transmembrane proteins, whose space arrangement [three-dimensional (3D) structure] is known, are investigated by using regular arrays of the amino acids. These structures, specifically cubes, have topological features similar to those shown by the chosen proteins. The theoretical results show a good agreement between the predicted current-voltage characteristics obtained from a cubic array and those obtained from a detailed 3D structure. The agreement is confirmed by available experiments on bacteriorhodopsin. Furthermore, all the analyzed proteins are found to share the same critical behavior of the voltage-dependent conductance and of its variance. In particular, the cubic arrangement evidences a short plateau of the excess conductance and its variance at high voltages. The results of the present investigation show the possibility to predict the I-V characteristics of a multiple-protein sample even in the absence of detailed knowledge of the proteins' 3D structure.

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http://dx.doi.org/10.1103/PhysRevE.93.062401DOI Listing

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