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| http://dx.doi.org/10.1136/jmg.26.6.410 | DOI Listing |
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TopoQual polishes circular consensus sequencing data and accurately predicts quality scores.
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Auburn University, Auburn, AL, 36849, USA.
Background: Pacific Biosciences (PacBio) circular consensus sequencing (CCS), also known as high fidelity (HiFi) technology, has revolutionized modern genomics by producing long (10 + kb) and highly accurate reads. This is achieved by sequencing circularized DNA molecules multiple times and combining them into a consensus sequence. Currently, the accuracy and quality value estimation provided by HiFi technology are more than sufficient for applications such as genome assembly and germline variant calling.
View Article and Find Full Text PDFCopillar[5]arene Appended Pyrene Schiff Base: Photophysics, Aggregation Induced Emission and Picric Acid Recognition.
Chem Asian J
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University of Kalyani, Chemistry, Kalyani, 741235, Kalyani, INDIA.
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Background And Objective: Accurate segmentation of the prostate region in magnetic resonance imaging (MRI) is crucial for prostate-related diagnoses. Recent studies have incorporated Transformers into prostate region segmentation to better capture long-range global feature representations. However, due to the computational complexity of Transformers, these studies have been limited to processing single slices.
View Article and Find Full Text PDFGMmorph: dynamic spatial matching registration model for 3D medical image based on gated Mamba.
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School of Software Engineering, Xi'an Jiaotong University, Xi 'an Jiaotong University Innovation Port, Xi 'an, Shaanxi Province, Xi'an, Shaanxi, 710049, CHINA.
Deformable registration aims to achieve nonlinear alignment of image space by estimating a dense displacement field. It is commonly used as a preprocessing step in clinical and image analysis applications, such as surgical planning, diagnostic assistance, and surgical navigation. We aim to overcome these challenges: Deep learning-based registration methods often struggle with complex displacements and lack effective interaction between global and local feature information.
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