Uniparental disomy of chromosome 16 unmasks recessive mutations of FA2H/SPG35 in 4 families.

Neurology

From the Institute of Medical Genetics and Applied Genomics (A.S.S., S.B.-W., K.S., O.R., P.B.) and Department of Neurology and Hertie Institute for Clinical Brain Research (T.W.R., R.S., L.S.), University of Tübingen; German Center of Neurodegenerative Diseases (DZNE) (T.W.R., R.S.), Tübingen, Germany; Imprinting and Cancer Group (D.M.), Cancer Epigenetic and Biology Program, Institut d'Investigació Biomedica de Bellvitge, Hospital Duran i Reynals, Barcelona, Spain; Department of Neuropediatrics (M.D.-N.), Tübingen University School of Medicine; CeGaT GmbH (K.H.), Tübingen, Germany; Neurometabolic Diseases Laboratory (A.S., M.R., A.P.), Institut d'Investigació Biomedica de Bellvitge IDIBELL, Hospital Duran i Reynals, Barcelona; Centre for Biomedical Research on Rare Diseases (CIBERER) (A.S., M.R., A.P.), Institute Carlos III, Madrid; Catalan Institution for Research and Advanced Studies (ICREA) (A.P.), Barcelona, Spain; and Hussman Institute for Human Genomics (S.Z., R.S.), University of Miami Miller School of Medicine, FL.

Published: July 2016

AI Article Synopsis

  • Objective: The study aimed to identify a unique mechanism for revealing recessive hereditary spastic paraplegias.
  • Method: Researchers discovered 4 new homozygous FA2H mutations in non-related families using whole-exome sequencing and targeted gene analysis, confirming one parent as a mutation carrier.
  • Results: All families exhibited uniparental disomy (UPD) leading to homozygous FA2H mutations, which is a rare mechanism in neurodegenerative diseases, emphasizing the necessity of segregation analysis in similar cases.

Article Abstract

Objective: Identifying an intriguing mechanism for unmasking recessive hereditary spastic paraplegias.

Method: Herein, we describe 4 novel homozygous FA2H mutations in 4 nonconsanguineous families detected by whole-exome sequencing or a targeted gene panel analysis providing high coverage of all known hereditary spastic paraplegia genes.

Results: Segregation analysis revealed in all cases only one parent as a heterozygous mutation carrier whereas the other parent did not carry FA2H mutations. A macro deletion within FA2H, which could have caused a hemizygous genotype, was excluded by multiplex ligation-dependent probe amplification in all cases. Finally, a microsatellite array revealed uniparental disomy (UPD) in all 4 families leading to homozygous FA2H mutations. UPD was confirmed by microarray analyses and methylation profiling.

Conclusion: UPD has rarely been described as causative mechanism in neurodegenerative diseases. Of note, we identified this mode of inheritance in 4 families with the rare diagnosis of spastic paraplegia type 35 (SPG35). Since UPD seems to be a relevant factor in SPG35 and probably additional autosomal recessive diseases, we recommend segregation analysis especially in nonconsanguineous homozygous index cases to unravel UPD as mutational mechanism. This finding may bear major repercussion for genetic counseling, given the markedly reduced risk of recurrence for affected families.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4940069PMC
http://dx.doi.org/10.1212/WNL.0000000000002843DOI Listing

Publication Analysis

Top Keywords

fa2h mutations
12
uniparental disomy
8
hereditary spastic
8
homozygous fa2h
8
spastic paraplegia
8
segregation analysis
8
families
5
upd
5
disomy chromosome
4
chromosome unmasks
4

Similar Publications

Article Synopsis
  • Mutations in several genes, like PANK2 and PLA2G6, are linked to different subtypes of the inherited disease Neurodegeneration with Brain Iron Accumulation (NBIA), with four main subtypes accounting for the majority of cases.
  • Recent findings suggest additional mutations affecting iron and lipid metabolism may also contribute to the disease's development.
  • A study on fibroblasts from patients with C19orf12 mutations found abnormalities that correlated with disease severity, indicating these cellular changes could be important in understanding the pathomechanism of NBIA.
View Article and Find Full Text PDF

Background: Hereditary Spastic Paraplegias (HSPs) and Hereditary Cerebellar Ataxias (HCAs) are progressive neurodegenerative disorders encompassing a spectrum of neurogenetic conditions with significant overlaps of clinical features. Spastic ataxias are a group of conditions that have features of both cerebellar ataxia and spasticity, and these conditions are frequently clinically challenging to distinguish. Accurate genetic diagnosis is crucial but challenging, particularly in resource-limited settings.

View Article and Find Full Text PDF

Illuminating the dark space of neutral glycosphingolipidome by selective enrichment and profiling at multi-structural levels.

Nat Commun

July 2024

MOE Key Laboratory of Bioorganic Phosphorus Chemistry & Chemical Biology, Department of Chemistry, Tsinghua University, Beijing, 100084, China.

Glycosphingolipids (GSLs) are essential components of cell membranes, particularly enriched in the nervous system. Altered molecular distributions of GSLs are increasingly associated with human diseases, emphasizing the significance of lipidomic profiling. Traditional GSL analysis methods are hampered by matrix effect from phospholipids and the difficulty in distinguishing structural isomers.

View Article and Find Full Text PDF

FA2H controls cool temperature sensing through modifying membrane sphingolipids in Drosophila.

Curr Biol

March 2024

Zhejiang Provincial Key Laboratory of Pancreatic Diseases, The First Affiliated Hospital of Zhejiang University School of Medicine, Hangzhou, Zhejiang 310003, China; The Institute of Translational Medicine, Zhejiang University School of Medicine, Hangzhou, Zhejiang 310003, China. Electronic address:

Animals have evolved the ability to detect ambient temperatures, allowing them to search for optimal living environments. In search of the molecules responsible for cold-sensing, we examined a Gal4 insertion line in the larvae of Drosophila melanogaster from previous screening work, which has a specific expression pattern in the cooling cells (CCs). We identified that the targeted gene, fa2h, which encodes a fatty acid 2-hydroxylase, plays an important role in cool temperature sensing.

View Article and Find Full Text PDF
Article Synopsis
  • The study focuses on the FA2H gene variants linked to spastic paraplegia type 35 (SPG35), which are inherited in an autosomal recessive manner and can also be associated with leukodystrophy and neurodegeneration involving brain iron accumulation.
  • A case is presented of a Turkish girl who experienced a spastic gait and other progressive motor issues starting at age seven, ultimately leading to a diagnosis after genetic testing revealed a harmful variant in the FA2H gene.
  • The findings suggest that although brain imaging showed no iron deposits in this patient, doctors should consider neurodegeneration due to FA2H variants in patients with early childhood gait deterioration, highlighting the diverse clinical manifestations of this condition.
View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!