Discovery of the first small-molecule CsrA-RNA interaction inhibitors using biophysical screening technologies.

Future Med Chem

Department of Drug Design & Optimization, Helmholtz Institute for Pharmaceutical Research Saarland (HIPS), Helmholtz Centre for Infection Research (HZI), Saarland University, Campus E8.1, 66123 Saarbrücken, Germany.

Published: June 2016

AI Article Synopsis

  • CsrA is an important regulator protein that impacts how bacteria manage their mRNA, playing a key role in their ability to cause infections, making it a target for new drugs.
  • The research involved two main methods: screening small molecules, which found seven inhibitors including one with significant potency, and an RNA-based approach that identified an RNA inhibitor with moderate effectiveness.
  • The discovery of these small-molecule inhibitors provides a new avenue to explore how inhibiting CsrA-RNA interactions can affect bacterial virulence, paving the way for potential treatments.

Article Abstract

Aim: CsrA is a global post-transcriptional regulator protein affecting mRNA translation and/or stability. Widespread among bacteria, it is essential for their full virulence and thus represents a promising anti-infective drug target. Therefore, we aimed at the discovery of CsrA-RNA interaction inhibitors. Results & methodology: We followed two strategies: a screening of small molecules (A) and an RNA ligand-based approach (B). Using surface plasmon resonance-based binding and fluorescence polarization-based competition assays, (A) yielded seven small-molecule inhibitors, among them MM14 (IC50 of 4 µM). (B) resulted in RNA-based inhibitor GGARNA (IC50 of 113 µM).

Conclusion: The first small-molecule inhibitors of the CsrA-RNA interaction were discovered exhibiting micromolar affinities. These hits represent tools to investigate the effects of CsrA-RNA interaction inhibition on bacterial virulence.

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Source
http://dx.doi.org/10.4155/fmc-2016-0033DOI Listing

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