Peptoid Library Agar Diffusion (PLAD) Assay for the High-Throughput Identification of Antimicrobial Peptoids.

ACS Comb Sci

Middle Tennessee State University, Department of Chemistry, 1301 East Main Street, Murfreesboro, Tennessee 37132, United States.

Published: June 2016

Rapid emergence of antimicrobial resistant organisms necessitates equally rapid methods for the development of new antimicrobial compounds. Of recent interest have been mimics of antimicrobial peptides known as antimicrobial peptoids, which exhibit similar potency to the former but with improved proteolytic stability. Presented herein is a high-throughput method to screen libraries of antimicrobial peptoids immobilized on beads embedded into solid media. Termed the peptoid library agar diffusion (PLAD) assay, this assay allows for individual chemical manipulation of two identical peptoid strands. One strand can be released to diffuse out from a solid support bead and interact with the microorganism during screening. The other strand can be cleaved after screening from beads showing strong antimicrobial activity and analyzed by mass spectrometry to deconvolute the structure of the peptoid. This method was applied to a small library of peptoids to identify an antimicrobial peptoid with modest efficacy against the ESKAPE pathogens.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5064948PMC
http://dx.doi.org/10.1021/acscombsci.6b00039DOI Listing

Publication Analysis

Top Keywords

antimicrobial peptoids
12
peptoid library
8
library agar
8
agar diffusion
8
diffusion plad
8
plad assay
8
antimicrobial
8
peptoid
5
assay high-throughput
4
high-throughput identification
4

Similar Publications

Article Synopsis
  • The rise of multidrug-resistant bacteria highlights the urgent need for new antimicrobial medicines, leading to the investigation of antimicrobial peptoids as potential alternatives.
  • Thirteen peptoid analogues were synthesized with varying alkyl side chains to analyze their antibacterial properties, and only one, called Tosyl-Octyl-Peptoid (TOP), showed significant broad-spectrum bactericidal activity.
  • TOP effectively kills bacteria in both dividing and non-dividing states, demonstrating promising minimum inhibitory concentrations and a high selectivity ratio, suggesting its potential as a future therapeutic option against resistant infections.
View Article and Find Full Text PDF

Peptoids are bio-inspired peptidomimetic polymers that can be designed to self-assemble into a variety of nanostructures. Among these different assemblies, peptoid nanosheets are the most studied. Peptoid nanosheets are 2D highly ordered nanostructures, able to free float in aqueous solutions while featuring versatile chemical displays that can be tuned to incorporate a plethora of functional units.

View Article and Find Full Text PDF

Peptide-Based Biomaterials for Combatting Infections and Improving Drug Delivery.

Pharmaceutics

November 2024

Department of Chemical Engineering, South Kensington Campus, Imperial College London, London SW7 2AZ, UK.

This review explores the potential of peptide-based biomaterials to enhance biomedical applications through self-assembly, biological responsiveness, and selective targeting. Peptides are presented as versatile agents for antimicrobial activity and drug delivery, with recent approaches incorporating antimicrobial peptides into self-assembling systems to improve effectiveness and reduce resistance. The review also covers peptide-based nanocarriers for cancer drug delivery, highlighting their improved stability, targeted delivery, and reduced side effects.

View Article and Find Full Text PDF

Aim: Previous studies have demonstrated that contact lenses coated with the antimicrobial cationic peptide Mel4, a derivative of melimine, can reduce the occurrence of keratitis. However, the antimicrobial activity of Mel4 weakened over time due to its susceptibility to proteolytic degradation. Oligo-N-substituted glycine peptoids such as TM5 and TM18 possess antimicrobial properties and are resistant to proteolytic breakdown.

View Article and Find Full Text PDF

Chemical Space for Peptide-based Antimicrobials.

Chimia (Aarau)

October 2024

Department of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, Freiestrasse 3, CH-3012 Bern, Switzerland.

Multidrug-resistant (MDR) bacteria represent a global public health threat, and antimicrobial peptides (AMPs), derived from naturally occurring linear or cyclic peptides, can provide the solution. However, most AMPs are sensitive to proteases and have poor pharmacokinetics. The EU-funded ERC Advanced Grant SPACE4AMPS aims to identify new AMPs by applying the concepts of chemical space and ligand-based virtual screening, which are well known for small molecule drug discovery, to the world of peptides.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!