Representatives of Mucorales belong to one of the oldest lineages of terrestrial fungi. Although carbon is of fundamental importance for fungal growth and functioning, relatively little is known about enzymatic capacities of Mucorales. The evolutionary history and the variability of the capacity to metabolize different carbon sources among representatives of the order Mucorales was studied using Phenotypic Microarray Plates. The ability of 26 strains belonging to 23 nonpathogenic species of Mucorales to use 95 different carbon sources was tested. Intraspecies variability of carbon assimilation profiles was lower than interspecies variation for some selected strains. Although similarities between the phylogenetic tree and the dendrogram created from carbon source utilization data were observed, the ability of the various strains to use the analyzed substrates did not show a clear correlation with the evolutionary history of the group. Instead, carbon assimilation profiles are probably shaped by environmental conditions.
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http://dx.doi.org/10.1016/j.funbio.2016.02.004 | DOI Listing |
Biotechnol Adv
December 2024
Biological and Environmental Science and Engineering Division (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, Makkah 23955, Saudi Arabia. Electronic address:
Some bacteria possess microcompartments that function as protein-based organelles. Bacterial microcompartments (BMCs) sequester enzymes to optimize metabolic reactions. Several BMCs have been characterized to date, including carboxysomes and metabolosomes.
View Article and Find Full Text PDFSci Total Environ
December 2024
Nanjing Institute of Environmental Sciences, Ministry of Ecology and Environment (MEE), Nanjing 210042, Jiangsu, China. Electronic address:
Cadmium (Cd) accumulation in rice poses significant risks to human health. The Cd accumulation levels vary widely among cultivars and are strongly associated with the rhizosphere microecosystem. However, the underlying mechanisms remain poorly understood.
View Article and Find Full Text PDFSci Total Environ
December 2024
Institute of Forestry and Pomology, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100093, Beijing, China; Beijing Yanshan Forest Ecosystem Positioning Observation and Research Station, Beijing 100093, China.
Water use efficiency (WUE) is a tracer for plants on the trade-off exchange of water and carbon dioxide between terrestrial ecosystems and the atmosphere; therefore, a dynamic investigation of WUE and its driving factors will be of great significance to optimize water and carbon fitness and predict the plants' response to climate change. In our study, a modified water use efficiency model was proposed to improve the quantification of carbon and water processes by adding a photosynthesis-g simulation dependent on CO concentration and soil moisture to the photosynthetic transpiration model (noted as SMPTSB model). Actual measured water use efficiencies were respectively obtained by the gas exchange measurements (WUE) and the δC that defined as the carbon-heavy isotope of the water-soluble compound in leaves (WUE) of three-year tree saplings of Platycladus orientalis (L.
View Article and Find Full Text PDFSci Total Environ
December 2024
Department of Biology (DBI), State University of Maringá, Av. Colombo, 5790 - Zona 7, Maringá, PR 87020-900, Brazil; Graduate Program in Ecology of Inland Water Ecosystems (PEA), State University of Maringá (UEM), Av. Colombo, 5790 - Zona 7, Maringá, PR 87020-900, Brazil; Nucleus of Limnology, Ictiology and Aquaculture (NUPELIA) of State University of Maringá (UEM). Av. Colombo, 5790 - Zona 7, Maringá, PR 87020-900, Brazil; Graduate Program Comparate Biology (PGB), State University of Maringá (UEM), Av. Colombo, 5790 - Zona 7, Maringá, PR 87020-900, Brazil.
Floodplains function as global hotspots for the natural production of methane. Some of this methane can be oxidized by methanotrophic bacteria and assimilated into their biomass before reaching the atmosphere. Consequently, aquatic invertebrates that feed on methanotrophic bacteria may transfer methane-derived carbon to higher trophic levels in the aquatic food chain.
View Article and Find Full Text PDFMetab Eng Commun
December 2024
Instituto de Tecnologia Química e Biológica António Xavier, Oeiras, Portugal.
Polyethylene Terephthalate (PET) is a petroleum-based plastic polymer that, by design, can last decades, if not hundreds of years, when released into the environment through plastic waste leakage. In the pursuit of sustainable solutions to plastic waste recycling and repurposing, the enzymatic depolymerization of PET has emerged as a promising green alternative. However, the metabolic potential of the resulting PET breakdown molecules, such as the two-carbon (C2) molecule ethylene glycol (EG), remains largely untapped.
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