Estimation from moments measurements for amyloid depolymerisation.

J Theor Biol

Virologie et Immunologie Moléculaires, Institut National de la Recherche Agronomique, F-78352 Jouy-en-Josas, France.

Published: May 2016

Estimating reaction rates and size distributions of protein polymers is an important step for understanding the mechanisms of protein misfolding and aggregation, a key feature for amyloid diseases. This study aims at setting this framework problem when the experimental measurements consist in the time-dynamics of a moment of the population (i.e. for instance the total polymerised mass, as in Thioflavin T measurements, or the second moment measured by Static Light Scattering). We propose a general methodology, and we solve the problem theoretically and numerically in the case of a depolymerising system. We then apply our method to experimental data of depolymerising oligomers, and conclude that smaller aggregates of ovPrP protein should be more stable than larger ones. This has an important biological implication, since it is commonly admitted that small oligomers constitute the most cytotoxic species during prion misfolding process.

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.jtbi.2016.02.037DOI Listing

Publication Analysis

Top Keywords

estimation moments
4
moments measurements
4
measurements amyloid
4
amyloid depolymerisation
4
depolymerisation estimating
4
estimating reaction
4
reaction rates
4
rates size
4
size distributions
4
distributions protein
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!