We use inverse methods of statistical mechanics to explore trade-offs associated with designing interactions to stabilize self-assembled structures against changes in density or temperature. Specifically, we find isotropic, convex-repulsive pair potentials that maximize the density range for which a two-dimensional square lattice is the stable ground state subject to a constraint on the chemical potential advantage it exhibits over competing structures (i.e., "depth" of the associated minimum on the chemical potential hypersurface). We formulate the design problem as a nonlinear program, which we solve numerically. This allows us to efficiently find optimized interactions for a wide range of possible chemical potential constraints. We find that assemblies designed to exhibit a large chemical potential advantage at a specified density have a smaller overall range of densities for which they are stable. This trend can be understood by considering the separation-dependent features of the pair potential and its gradient required to enhance the stability of the target structure relative to competitors. Using molecular dynamics simulations, we further show that potentials designed with larger chemical potential advantages exhibit higher melting temperatures.
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http://dx.doi.org/10.1063/1.4942117 | DOI Listing |
Chemphyschem
January 2025
Fachbereich Chemie, Philipps-Universität Marburg, 35032, Marburg, Germany.
Both, molecular chemical reactions and transport of atoms in solid media are determined by the energy landscape in which the seemingly different processes take place. Chemical reactions can be described as cooperative translocation of two chemical entities on a common potential energy surface. Transport of atoms in a solid can be envisaged as the translocation of a single particle in the potential energy landscape of all other particles constituting the solid.
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State Key Laboratory of Radiation Medicine and Protection, School of Radiation Medicine and Protection, Suzhou Medical School, Soochow University, Suzhou, Jiangsu, 215123, China.
Background: The advancement of nanotechnology underscores the imperative need for establishing in silico predictive models to assess safety, particularly in the context of chronic respiratory afflictions such as lung fibrosis, a pathogenic transformation that is irreversible. While the compilation of predictive descriptors is pivotal for in silico model development, key features specifically tailored for predicting lung fibrosis remain elusive. This study aimed to uncover the essential predictive descriptors governing nanoparticle-induced pulmonary fibrosis.
View Article and Find Full Text PDFBMC Neurol
January 2025
Department of Neurology, Haiyan People's Hospital, Jiaxing City, 314300, Zhejiang Province, China.
Background: Sodium-glucose cotransporter-2(SGLT-2) inhibitors are a newer class of antidiabetic drugs with the increased risk of euglycemic diabetic ketoacidosis(EuDKA). Encephalopathy is a rare but life-threatening event of EuDKA. Due to paradoxically normal or slightly elevated serum glucose levels, it's easy to be mimicked by cerebral infarction, structural brain damage, thus leading to delayed diagnosis and causing seriously irreversible brain injury.
View Article and Find Full Text PDFBiometals
January 2025
Instituto de Química, Universidade de São Paulo, Av. Lineu Prestes 748, São Paulo, 05508-000, Brazil.
Zinc is an essential metal to living organisms, including corals and their symbiotic microalgae (Symbiodiniaceae). Both Zn(II) deprivation and overload are capable of leading to dysfunctional metabolism, coral bleaching, and even organism death. The present work investigated the effects of chemically defined Zn species (free Zn, ZnO nanoparticles, and the complexes Zn-histidinate and Zn-EDTA) over the growth of the dinoflagellates Symbiodinium microadriaticum, Breviolum minutum, and Effrenium voratum, and on the trypsin-like proteolytic activity of the hydrocoral Millepora alcicornis.
View Article and Find Full Text PDFEnviron Sci Pollut Res Int
January 2025
Slovak Hydrometeorological Institute, Jeséniova 17, Bratislava, 833 15, Slovakia.
This study focused on testing the response of the assimilation apparatus of evergreen Pinaceae species to increasing levels of oxidative stress simulated in manipulative experiments. Needles were collected from mature individuals of Pinus mugo, Pinus cembra, Pinus sylvestris, Abies alba, and Picea abies at the foothill (FH) and alpine treeline ecotone (ATE) in the High Tatras (Western Carpathians). The injury index (INX), quantified by the modified electrolyte leakage (EL) method, indicated severe needle damage due to exposure to extremely high levels of O.
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