High-throughput screening of high Monascus pigment-producing strain based on digital image processing.

J Ind Microbiol Biotechnol

State Key Laboratory of Biochemical Engineering, Institute of Process Engineering, Chinese Academy of Sciences, Beijing, 100190, China.

Published: April 2016

AI Article Synopsis

  • - The study introduces an automated method using image processing and support vector machines (SVM) to efficiently screen mold strains, specifically focusing on Monascus colonies.
  • - It achieved an accuracy of 80.6%, which is comparable to traditional methods, and can screen 500 colonies in just 20-30 minutes, making it the fastest published approach.
  • - Utilizing this method, researchers identified 13 high-producing strains, with the top strain yielding 2.8 times more pigment and 1.9 times more lovastatin than the original strain.

Article Abstract

This work proposed a new method which applied image processing and support vector machine (SVM) for screening of mold strains. Taking Monascus as example, morphological characteristics of Monascus colony were quantified by image processing. And the association between the characteristics and pigment production capability was determined by SVM. On this basis, a highly automated screening strategy was achieved. The accuracy of the proposed strategy is 80.6 %, which is compatible with the existing methods (81.1 % for microplate and 85.4 % for flask). Meanwhile, the screening of 500 colonies only takes 20-30 min, which is the highest rate among all published results. By applying this automated method, 13 strains with high-predicted production were obtained and the best one produced as 2.8-fold (226 U/mL) of pigment and 1.9-fold (51 mg/L) of lovastatin compared with the parent strain. The current study provides us with an effective and promising method for strain improvement.

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Source
http://dx.doi.org/10.1007/s10295-015-1729-zDOI Listing

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