The aim of this work is to incorporate cooperativity into Huxley-type cross-bridge model in thermodynamically consistent way. While the Huxley-type models assume that cross-bridges act independently from each other, we take into account that each cross-bridge is influenced by its neighbors and cooperativity is induced by tropomyosin movement. For that, we introduce ensembles of cross-bridge groups connected by elastic tropomyosin. By taking into account that the mechanical displacement of tropomyosin induces free energy change of the cross-bridge group ensemble, we develop the formalism for thermodynamically consistent description of the cooperativity in muscle contraction. An example model was composed to test the approach. The model parameters were found by optimization from the linear relation between oxygen consumption and stress-strain area as well as experimentally measured stress dynamics of rat trabecula. We have found a good agreement between the optimized model solution and experimental data. Simulations also showed that it is possible to study cooperativity with the approach developed in this work.
Download full-text PDF |
Source |
---|---|
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4567334 | PMC |
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0137438 | PLOS |
J Phys Chem B
December 2024
Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802, United States.
The cloud point temperatures of aqueous poly(-isopropylacrylamide) (PNIPAM) and poly(ethylene) oxide (PEO) solutions were measured from pH 1.0 to pH 13.0 at a constant ionic strength of 100 mM.
View Article and Find Full Text PDFEcol Lett
January 2025
Department of Entomology and Nematology, University of California, Davis, Davis, California, USA.
Plant-microbe associations are ubiquitous, but parsing contributions of dispersal, host filtering, competition and temperature on microbial community composition is challenging. Floral nectar-inhabiting microbes, which can influence flowering plant health and pollination, offer a tractable system to disentangle community assembly processes. We inoculated a synthetic community of yeasts and bacteria into nectars of 31 plant species while excluding pollinators.
View Article and Find Full Text PDFLangmuir
December 2024
Department of Physical Chemistry, Faculty of Chemistry and Petroleum Sciences, Bu-Ali Sina University, Hamedan 65167 ,Iran.
Interfacial solar evaporator generation (ISVG) is a new, cost-effective, and eco-friendly emerging method for water desalination. Two main criteria for evaluating ISVG performance are evaporation rate () and solar-to-vapor conversion efficiency (η). The main challenge of the previously presented models for the estimation of and η in 2D systems is that in most cases the calculated values are beyond the theoretical limits, > 1.
View Article and Find Full Text PDFMar Drugs
December 2024
Discipline of Dietetics and Nutrition, College of Agriculture, University of KwaZulu-Natal, Durban 3201, South Africa.
Collagen, a critical biomaterial with wide applications in pharmaceuticals, cosmetics, and medical industries, can be sourced sustainably from fish scales. This study optimizes the extraction of collagen using Tris-Glycine buffer from fish scales via the Taguchi method. Various extraction parameters-buffer concentration, temperature, pH, and time-were evaluated to identify optimal conditions.
View Article and Find Full Text PDFPLoS One
December 2024
Dipartimento di Geoscienze, Università degli Studi di Padova, Padova, Italy.
A high-resolution record of central Mediterranean Sea Surface Temperatures (SSTs) based on the alkenone UK'37 index and planktic δ18O values for the surface-dweller G. ruber has been reconstructed across the Pliocene/Pleistocene transition at Monte San Nicola (Sicily), reference area for the GSSP (Global Boundary Stratotype Section and Point) of the Gelasian Stage. Spectral analyses indicate that the SST record is predominantly paced by a cyclicity in the ~47 kyr time domain, consistent with the obliquity driven glacial-interglacial variability that is expected to dominate in the interval of relevance.
View Article and Find Full Text PDFEnter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!