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Development of nuclear and chloroplast microsatellite markers for the endangered conifer Callitris sulcata (Cupressaceae). | LitMetric

Development of nuclear and chloroplast microsatellite markers for the endangered conifer Callitris sulcata (Cupressaceae).

Appl Plant Sci

Laboratory of Plant Evolution and Biodiversity, Department of General Systems Studies, Graduate School of Arts and Sciences, University of Tokyo, Komaba 1538902, Japan.

Published: August 2015

Premise Of The Study: Microsatellite markers were developed for Callitris sulcata (Cupressaceae), an endangered conifer species in New Caledonia.

Methods And Results: Using sequencing by synthesis (SBS) of an RNA-Seq library, 15 polymorphic nuclear and chloroplast microsatellite markers were developed. When evaluated with 48 individuals, these markers showed genetic variations ranging from two to 15 alleles and expected heterozygosity ranging from 0 to 0.881.

Conclusions: These markers will be useful for examining the genetic diversity and structure of remaining wild populations and improving the genetic status of ex situ populations.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4542945PMC
http://dx.doi.org/10.3732/apps.1500045DOI Listing

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