Evolutionary dynamics of a polymorphic self-replicator population with a finite population size and hyper mutation rate.

J Theor Biol

Exploratory Research for Advanced Technology, Japan Science and Technology Agency, Yamadaoka 1-5, Suita, Osaka, Japan; Department of Bioinformatic Engineering, Graduate School of Information Science and Technology, Osaka University, Yamadaoka 1-5, Suita, Osaka, Japan; Graduate School of Frontier Biosciences, Osaka University, Yamadaoka 1-5, Suita, Osaka, Japan. Electronic address:

Published: October 2015

AI Article Synopsis

  • Self-replicating biomolecules with hyper mutation rates can evolve in distinct ways based on two selection modes: "radical mode" and "gentle mode."
  • In the radical mode, only a few high-fitness genotypes reproduce, leading to quick progress but lower overall fitness, while the gentle mode allows for more moderate-fitness genotypes to reproduce, resulting in slower evolution but higher fitness levels.
  • The study used a Kauffman's "NK fitness landscape" to analyze how various factors like mutation rate and population size influence evolutionary dynamics, highlighting the trade-offs between speed and fitness achieved in different selection modes.

Article Abstract

Self-replicating biomolecules, subject to experimental evolution, exhibit hyper mutation rates where the genotypes of most offspring have at least a one point mutation. Thus, we formulated the evolutionary dynamics of an asexual self-replicator population with a finite population size and hyper mutation rate, based on the probability density of fitnesses (fitness distribution) for the evolving population. As a case study, we used a Kauffman's "NK fitness landscape". We deduced recurrence relations for the first three cumulants of the fitness distribution and compared them with the results of computer simulations. We found that the evolutionary dynamics is classified in terms of two modes of selection: the "radical mode" and the "gentle mode". In the radical mode, only a small number of genotypes with the highest or near highest fitness values can leave offspring. In the gentle mode, genotypes with moderate fitness values can leave offspring. We clarified how the evolutionary equilibrium and climbing rate depend on given parameters such as gradient and ruggedness of the landscape, mutation rate and population size, in terms of the two modes of selection. Roughly, the radical mode conducts the fast climbing but attains to the stationary states with low fitness, while the gentle mode conducts the slow climbing but attains to the stationary states with high fitness.

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.jtbi.2015.07.007DOI Listing

Publication Analysis

Top Keywords

evolutionary dynamics
12
population size
12
hyper mutation
12
mutation rate
12
self-replicator population
8
population finite
8
finite population
8
size hyper
8
fitness distribution
8
terms modes
8

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!