In this study, we describe a de novo sequencing and assembly of the spleen transcriptome of Lepidonotothen nudifrons, a notothenioid fish widely distributed around the Antarctic Peninsula and the Scotia Arc. Sequences were generated on an Illumina MiSeq system and assembled to a total of 112,477 transcripts. Putative functional annotation was possible for more than 34% of the transcripts. This data will be relevant for future studies targeting the erythrocyte turnover, oxygen transport mechanism and immune system, which are key functional traits to investigate cold adaptation and thermal sensitivity of Antarctic notothenioids.

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.margen.2015.06.006DOI Listing

Publication Analysis

Top Keywords

spleen transcriptome
8
notothenioid fish
8
lepidonotothen nudifrons
8
insight spleen
4
transcriptome notothenioid
4
fish lepidonotothen
4
nudifrons resource
4
resource description
4
description functional
4
functional overview
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!