A PHP Error was encountered

Severity: Warning

Message: file_get_contents(https://...@pubfacts.com&api_key=b8daa3ad693db53b1410957c26c9a51b4908&a=1): Failed to open stream: HTTP request failed! HTTP/1.1 429 Too Many Requests

Filename: helpers/my_audit_helper.php

Line Number: 176

Backtrace:

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 176
Function: file_get_contents

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 250
Function: simplexml_load_file_from_url

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 3122
Function: getPubMedXML

File: /var/www/html/application/controllers/Detail.php
Line: 575
Function: pubMedSearch_Global

File: /var/www/html/application/controllers/Detail.php
Line: 489
Function: pubMedGetRelatedKeyword

File: /var/www/html/index.php
Line: 316
Function: require_once

The Use of Atomic Force Microscopy for 3D Analysis of Nucleic Acid Hybridization on Microarrays. | LitMetric

The Use of Atomic Force Microscopy for 3D Analysis of Nucleic Acid Hybridization on Microarrays.

Acta Naturae

Department of Physics, Lomonosov Moscow State University, Leninskie gory, 1/2, 119991, Moscow, Russia ; Department of Chemistry, Lomonosov Moscow State University, Leninskie gory, 1/3, 119991, Moscow, Russia.

Published: June 2015

AI Article Synopsis

  • Oligonucleotide microarrays are a key method for gene diagnostics, and atomic force microscopy (AFM) enhances their analysis by providing detailed 3D images of the molecules.
  • AFM's high resolution helps lower detection limits for target DNA and improve the signal-to-noise ratio, making it more effective for measuring nucleic acids on microarrays.
  • The study proposes a new way to evaluate hybridization results of gold nanoparticle-labeled nucleic acids on silicon microarrays, using AFM to quantify the area occupied by the nanoparticles on the surface.

Article Abstract

Oligonucleotide microarrays are considered today to be one of the most efficient methods of gene diagnostics. The capability of atomic force microscopy (AFM) to characterize the three-dimensional morphology of single molecules on a surface allows one to use it as an effective tool for the 3D analysis of a microarray for the detection of nucleic acids. The high resolution of AFM offers ways to decrease the detection threshold of target DNA and increase the signal-to-noise ratio. In this work, we suggest an approach to the evaluation of the results of hybridization of gold nanoparticle-labeled nucleic acids on silicon microarrays based on an AFM analysis of the surface both in air and in liquid which takes into account of their three-dimensional structure. We suggest a quantitative measure of the hybridization results which is based on the fraction of the surface area occupied by the nanoparticles.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4463420PMC

Publication Analysis

Top Keywords

atomic force
8
force microscopy
8
nucleic acids
8
microscopy analysis
4
analysis nucleic
4
nucleic acid
4
acid hybridization
4
hybridization microarrays
4
microarrays oligonucleotide
4
oligonucleotide microarrays
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!