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Activity and anion inhibition studies of the α-carbonic anhydrase from Thiomicrospira crunogena XCL-2 Gammaproteobacterium. | LitMetric

Activity and anion inhibition studies of the α-carbonic anhydrase from Thiomicrospira crunogena XCL-2 Gammaproteobacterium.

Bioorg Med Chem Lett

Department of Biochemistry and Molecular Biology, University of Florida, College of Medicine, 100 Newell Dr LG-171, Gainesville, FL 32610, United States. Electronic address:

Published: November 2015

AI Article Synopsis

  • Thiomicrospira crunogena XCL-2 has an important enzyme called α-carbonic anhydrase (TcruCA) that shows over 30% sequence similarity to other similar enzymes, featuring key histidines that interact with zinc in its active site.
  • TcruCA's catalytic efficiency is moderate compared to other α-CAs, operating at a rate of 1.1×10(7) M(-1) s(-1), which is ten times less efficient than the most effective ones.
  • The enzyme is inhibited by various anions, with the highest affinity for hydrogen sulfide (HS(-)), which may help the organism control its carbon-concentrating mechanism (CCM)

Article Abstract

Thiomicrospira crunogena XCL-2 expresses an α-carbonic anhydrase (TcruCA). Sequence alignments reveal that TcruCA displays a high sequence identity (>30%) relative to other α-CAs. This includes three conserved histidines that coordinate the active site zinc, a histidine proton shuttling residue, and opposing hydrophilic and hydrophobic sides that line the active site. The catalytic efficiency of TcruCA is considered moderate relative to other α-CAs (k(cat)/K(M)=1.1×10(7) M(-1) s(-1)), being a factor of ten less efficient than the most active α-CAs. TcruCA is also inhibited by anions with Cl(-), Br(-), and I(-), all showing Ki values in the millimolar range (53-361 mM). Hydrogen sulfide (HS(-)) revealed the highest affinity for TcruCA with a Ki of 1.1 μM. It is predicted that inhibition of TcruCA by HS(-) (an anion commonly found in the environment where Thiomicrospira crunogena is located) is a way for Thiomicrospira crunogena to regulate its carbon-concentrating mechanism (CCM) and thus the organism's metabolic functions. Results from this study provide preliminary insights into the role of TcruCA in the general metabolism of Thiomicrospira crunogena.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5358508PMC
http://dx.doi.org/10.1016/j.bmcl.2015.05.001DOI Listing

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