We propose interspecies quantitative structure-activity-activity relationships (QSAARs), that is, QSARs with descriptors, to estimate species-specific acute aquatic toxicity. Using training datasets consisting of more than 100 aromatic amines and phenols, we found that the descriptors that predicted acute toxicities to fish (Oryzias latipes) and algae were daphnia toxicity, molecular weight (an indicator of molecular size and uptake) and selected indicator variables that discriminated between the absence or presence of various substructures. Molecular weight and the selected indicator variables improved the goodness-of-fit of the fish and algae toxicity prediction models. External validations of the QSAARs proved that algae toxicity could be predicted within 1.0 log unit and revealed structural profiles of outlier chemicals with respect to fish toxicity. In addition, applicability domains based on leverage values provided structural alerts for the predicted fish toxicity of chemicals with more than one hydroxyl or amino group attached to an aromatic ring, but not for fluoroanilines, which were not included in the training dataset. Although these simple QSAARs have limitations, their applicability is defined so clearly that they may be practical for screening chemicals with molecular weights of ≤364.9.

Download full-text PDF

Source
http://dx.doi.org/10.1080/1062936X.2015.1032347DOI Listing

Publication Analysis

Top Keywords

interspecies quantitative
8
quantitative structure-activity-activity
8
structure-activity-activity relationships
8
relationships qsaars
8
acute aquatic
8
aquatic toxicity
8
aromatic amines
8
amines phenols
8
molecular weight
8
selected indicator
8

Similar Publications

Knockout of a testis-specific gene cluster impairs male fertility in the fall armyworm, Spodoptera frugiperda.

Pest Manag Sci

January 2025

Key Laboratory of Plant Protection Resources and Pest Management of the Ministry of Education, Key Laboratory of Integrated Pest Management on the Loess Plateau of Ministry of Agriculture and Rural Affairs, College of Plant Protection, Northwest A&F University, Yangling, China.

Background: The function of some testis-specific genes (TSGs) in model insects have been studied, but their function in non-model insects remains largely unexplored. In the present study, we identified several TSGs in the fall armyworm (FAW), a significant agricultural pest, through comparative transcriptomic analysis. A testis-specific gene cluster (TSGC) comprising multiple functional genes and long non-coding RNAs was found.

View Article and Find Full Text PDF

Personalized gut microbial community modeling by leveraging genome-scale metabolic models and metagenomics.

Curr Opin Biotechnol

December 2024

Key Laboratory of Quantitative Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China. Electronic address:

The impact of the gut microbiome on human health is increasingly recognized as dysbiosis has been found to be associated with a spectrum of diseases. Here, we review the databases of genome-scale metabolic models (GEMs), which have paved the way for investigations into the metabolic capabilities of gut microbes and their interspecies dynamics. We further discuss the strategies for developing community-level GEMs, which are crucial for understanding the complex interactions within microbial communities and between the microbiome and its host.

View Article and Find Full Text PDF

Toxicity assessment and i-QSTTR analysis of ionic liquids on D. magna, D. rerio, and R. subcapitata.

Sci Total Environ

December 2024

School of Pharmacy, Lanzhou University, Lanzhou 730000, China; Hubei Key Laboratory of Environmental and Health Effects of Persistent Toxic Substances, School of Environment and Health, Jianghan University, Wuhan 430056, China. Electronic address:

The study aimed to assess the impacts of ionic liquids (ILs) as innovative alternatives to traditional organic solvents on aquatic environments and human health. Five machine learning methods, including multiple linear regression (MLR), partial least squares regression (PLS), random forest regression (RF), support vector regression (SVR), and extreme gradient boosting (XGBoost), were used to construct the prediction models of the toxicity of ILs to D. magna, D.

View Article and Find Full Text PDF

species are rich in protein, fiber, minerals, and other nutrients and have various health benefits. The genus is taxonomically difficult due to the high phenotypic plasticity and the spontaneous interspecies introgression and hybridization between species. The purpose of this study is to evaluate the possibilities of near-infrared spectroscopy (NIRS) for the taxonomic differentiation of some of the species common in Bulgaria and estimate their polyphenolic compounds.

View Article and Find Full Text PDF

Determining the number of viable cells by calculating colony-forming units is time-consuming. The evaluation of mixed biofilms consisting of different species is particularly problematic. Therefore, the aim of this study was to optimize a molecular method-propidium monoazide quantitative polymerase chain reaction (PMA-qPCR)-for accurate and consistent differentiation between living and dead cells.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!