At the time of its first publication, halomucin from Haloquadratum walsbyi strain HBSQ001 was the largest archaeal protein known (9159 aa). It has a predicted signal sequence, making it likely to be an extracellular or secreted protein. Best BLAST matches were found to be mammalian mucins that protect tissues to dehydration and chemical stress. It was hypothesized that halomucin participates in protection against desiccation by retaining water in a hull around the halophilic organisms that live at the limits of water activity. We visualized Haloquadratum cells by staining their intracellular polyhydroxybutyrate granules using Nile Blue. Halomucin was stained by immunofluorescence with antibodies generated against synthetic peptides derived from the halomucin amino acid sequence. Polyhydroxybutyrate stained cells were reconstructed in 3D which highlights not only the highly regular square shape but also the extreme flatness of Haloquadratum. Double-staining proves halomucin to be extracellular but to be only loosely associated to cells in agreement with its hypothesized function.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4378361PMC
http://dx.doi.org/10.3389/fmicb.2015.00249DOI Listing

Publication Analysis

Top Keywords

haloquadratum walsbyi
8
halomucin
6
fluorescence microscopy
4
microscopy visualization
4
visualization halomucin
4
halomucin secreted
4
secreted 927
4
927 kda
4
kda protein
4
protein surrounding
4

Similar Publications

Article Synopsis
  • The study investigated how extreme halophiles in salt-rich environments react to repeated dilution of salinity, showing that their dominance shifts based on the level of stress.
  • Under moderate stress (20% salinity), dominant species like Haloquadratum walsbyi and Salinibacter ruber thrived, while under stronger stress (13% salinity), they were replaced by more adaptable species.
  • These findings suggest that genus-level diversity is crucial for ecological resilience, with species replacements occurring alongside viral co-evolution, highlighting the dynamic adaptability of brine microbial communities.
View Article and Find Full Text PDF

Global Distribution and Diversity of Haloarchaeal pL6-Family Plasmids.

Genes (Basel)

August 2024

Computational Systems Biochemistry, Max-Planck-Institute of Biochemistry, 82152 Martinsried, Germany.

Australian isolates of , a square-shaped haloarchaeon, often harbor small cryptic plasmids of the pL6-family, approximately 6 kb in size, and five examples have been previously described. These plasmids exhibit a highly conserved gene arrangement and encode replicases similar to those of betapleolipoviruses. To assess their global distribution and recover more examples for analysis, fifteen additional plasmids were reconstructed from the metagenomes of seven hypersaline sites across four countries: Argentina, Australia, Puerto Rico, and Spain.

View Article and Find Full Text PDF

Despite advances in sequencing, lack of standardization makes comparisons across studies challenging and hampers insights into the structure and function of microbial communities across multiple habitats on a planetary scale. Here we present a multi-omics analysis of a diverse set of 880 microbial community samples collected for the Earth Microbiome Project. We include amplicon (16S, 18S, ITS) and shotgun metagenomic sequence data, and untargeted metabolomics data (liquid chromatography-tandem mass spectrometry and gas chromatography mass spectrometry).

View Article and Find Full Text PDF
Article Synopsis
  • Solar crystallizer ponds have a high density of a simple microbial community, primarily dominated by a type of archaeon, particularly in the Santa Pola region of Spain.
  • A study comparing metatranscriptomes from the natural pond environment to a cultured strain revealed significant differences in gene expression, indicating that natural strains adapt better to varied environmental stressors than cultivated ones.
  • Seasonal analysis showed 195 differentially expressed genes, with 140 genes more active in winter, mostly related to energy acquisition and stress response mechanisms.
View Article and Find Full Text PDF

A conserved Trp residue in HwBR contributes to its unique tolerance toward acidic environments.

Biophys J

August 2022

Department of Biochemical Science and Technology, College of Life Science, National Taiwan University, Taipei, Taiwan. Electronic address:

Bacteriorhodopsin (BR) is a light-driven outward proton pump found mainly in halophilic archaea. A BR from an archaeon Haloquadratum walsbyi (HwBR) was found to pump protons under more acidic conditions compared with most known BR proteins. The atomic structural study on HwBR unveiled that a pair of hydrogen bonds between the BC and FG loop in its periplasmic region may be a factor in such improved pumping capability.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!