Exometabolomics and MSI: deconstructing how cells interact to transform their small molecule environment.

Curr Opin Biotechnol

Life Sciences Division, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA 94720, USA; Joint Genome Institute, Department of Energy, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA. Electronic address:

Published: August 2015

Metabolism is at the heart of many biotechnologies from biofuels to medical diagnostics. Metabolomic methods that provide glimpses into cellular metabolism have rapidly developed into a critical component of the biotechnological development process. Most metabolomics methods have focused on what is happening inside the cell. Equally important are the biochemical transformations of the cell, and their effect on other cells and their environment; the exometabolome. Exometabolomics is therefore gaining popularity as a robust approach for obtaining rich phenotypic data, and being used in bioprocessing and biofuel development. Mass spectrometry imaging approaches, including several nanotechnologies, provide complimentary information by localizing metabolic processes within complex biological matrices. Together, the two technologies can provide new insights into the metabolism and interactions of cells.

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.copbio.2015.03.015DOI Listing

Publication Analysis

Top Keywords

exometabolomics msi
4
msi deconstructing
4
deconstructing cells
4
cells interact
4
interact transform
4
transform small
4
small molecule
4
molecule environment
4
environment metabolism
4
metabolism heart
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!