Front line defenders of the ecological niche! Screening the structural diversity of peptaibiotics from saprotrophic and fungicolous species.

Fungal Divers

Interdisciplinary Research Centre for BioSystems, Land Use and Nutrition (IFZ), Department of Applied Entomology, Institute of Phytopathology and Applied Zoology (IPAZ), University of Giessen, Heinrich-Buff-Ring 26-32, 35392 Giessen, Germany

Published: November 2014

Approximately 950 individual sequences of non-ribosomally biosynthesised peptides are produced by the genus / that belong to a perpetually growing class of mostly linear antibiotic oligopeptides, which are rich in the non-proteinogenic -aminoisobutyric acid (Aib). Thus, they are comprehensively named peptaibiotics. Notably, peptaibiotics represent ca. 80 % of the total inventory of secondary metabolites currently known from . Their unique membrane-modifying bioactivity results from amphipathicity and helicity, thus making them ideal candidates in assisting both colonisation and defence of the natural habitats by their fungal producers. Despite this, reports on the in vivo-detection of peptaibiotics have scarcely been published in the past. In order to evaluate the significance of peptaibiotic production for a broader range of potential producers, we screened nine specimens belonging to seven hitherto uninvestigated fungicolous or saprotrophic species by liquid chromatography coupled to electrospray high resolution mass spectrometry. Sequences of peptaibiotics found were independently confirmed by analysing the peptaibiome of pure agar cultures obtained by single-ascospore isolation from the specimens. Of the nine species examined, five were screened positive for peptaibiotics. A total of 78 peptaibiotics were sequenced, 56 (=72 %) of which are new. Notably, dihydroxyphenylalaninol and -prenylated tyrosinol, two -terminal residues, which have not been reported for peptaibiotics before, were found as well as new and recurrent sequences carrying the recently described tyrosinol residue at their -terminus. The majority of peptaibiotics sequenced are 18- or 19-residue peptaibols. Structural homologies with 'classical representatives' of subfamily 1 (SF1)-peptaibiotics argue for the formation of transmembrane ion channels, which are prone to facilitate the producer capture and defence of its substratum.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4338523PMC
http://dx.doi.org/10.1007/s13225-013-0276-zDOI Listing

Publication Analysis

Top Keywords

peptaibiotics
9
peptaibiotics sequenced
8
front defenders
4
defenders ecological
4
ecological niche!
4
niche! screening
4
screening structural
4
structural diversity
4
diversity peptaibiotics
4
peptaibiotics saprotrophic
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!