Evolution. Response to Comment on "A promiscuous intermediate underlies the evolution of LEAFY DNA binding specificity".

Science

CNRS, Laboratoire de Physiologie Cellulaire et Végétale (LPCV), UMR 5168, 38054 Grenoble, France. UGA, LPCV, F-38054 Grenoble, France. Commissariat à l'énergie atomique et aux énergies alternatives, Direction des Sciences du Vivant, Institut de Recherches en Technologies et Sciences pour le Vivant, LPCV, F-38054 Grenoble, France. Institut National de la Recherche Agronomique, LPCV, F-38054 Grenoble, France.

Published: February 2015

Brunkard et al. propose that the identification of novel LEAFY sequences contradicts our model of evolution through promiscuous intermediates. Based on the debate surrounding land plant phylogeny and on our analysis of these interesting novel sequences, we explain why there is no solid evidence to disprove our model.

Download full-text PDF

Source
http://dx.doi.org/10.1126/science.1256011DOI Listing

Publication Analysis

Top Keywords

evolution response
4
response comment
4
comment promiscuous
4
promiscuous intermediate
4
intermediate underlies
4
underlies evolution
4
evolution leafy
4
leafy dna
4
dna binding
4
binding specificity"
4

Similar Publications

Microbial communities associated with the skin, gill, and gut of large yellow croaker (Larimichthys crocea).

BMC Microbiol

January 2025

Zhejiang Provincial Key Laboratory of Plant Evolutionary Ecology and Conservation, Taizhou Key Laboratory of Biomedicine and Advanced Dosage Forms, School of Life Sciences, Taizhou University, Taizhou, 318000, Zhejiang Province, China.

The microbiota inhabiting the surface of fish mucosal tissue play important roles in the nutrition, metabolism and immune system of their host. However, most investigations on microbial symbionts have focused on the fish gut, but the microbiota associated with external mucosal tissues (such as the skin and gill) is poorly understood. This study characterised the traits and dynamic of microbial communities associated with the skin, gill and gut of large yellow croaker (Larimichthys crocea) culturing with net enclosures or pens at different sampling times (with seasonal transition).

View Article and Find Full Text PDF

Two-component system GrpP/GrpQ promotes pathogenicity of uropathogenic Escherichia coli CFT073 by upregulating type 1 fimbria.

Nat Commun

January 2025

National Key Laboratory of Intelligent Tracking and Forecasting for Infectious Diseases, TEDA Institute of Biological Sciences and Biotechnology, Nankai University, Tianjin, China.

Uropathogenic Escherichia coli (UPEC) is a major cause of urinary tract infections (UTIs). Invasion into bladder epithelial cells (BECs) on the bladder luminal surface via type 1 fimbria is the first critical step in UPEC infection. Although type 1 fimbria expression increases during UPEC invasion of BECs, the underlying regulatory mechanisms remain poorly understood.

View Article and Find Full Text PDF

Tailoring industrial enzymes for thermostability and activity evolution by the machine learning-based iCASE strategy.

Nat Commun

January 2025

Key Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi, PR China.

The pursuit of obtaining enzymes with high activity and stability remains a grail in enzyme evolution due to the stability-activity trade-off. Here, we develop an isothermal compressibility-assisted dynamic squeezing index perturbation engineering (iCASE) strategy to construct hierarchical modular networks for enzymes of varying complexity. Molecular mechanism analysis elucidates that the peak of adaptive evolution is reached through a structural response mechanism among variants.

View Article and Find Full Text PDF

Clay-catalyzed ozonation of Norfloxacin - Effects of metal cation and degradation rate on aqueous media toxicity towards Lemna minor.

Chemosphere

January 2025

Nanoqam, Department of Chemistry, University of Quebec at Montreal, H3C 3P8, Canada; École de technologie supérieure, Montréal (Québec), Canada, H3C 1K3. Electronic address:

Article Synopsis
  • Norfloxacin was ozonized in clay suspensions to study its toxicity on Lemna minor, which helps assess antibiotic impact in environments with clay.
  • The study found that norfloxacin causes toxicity in Lemna minor through oxidative stress, worsened by ozonation, affecting growth and chlorophyll levels.
  • Results indicate that the type of clay catalyst and the oxidation process influence the toxicity outcomes, revealing the potential formation of more harmful byproducts from the antibiotic.
View Article and Find Full Text PDF

Dinotefuran (DIN) is toxic to non-target organisms and accelerates the evolution of antibiotic resistance, which poses a problem for the stable operation of the activated sludge process in wastewater treatment plants (WWTPs). However, the emergence and the transfer mechanism of antibiotic resistance genes (ARGs) in activated sludge systems under DIN stress remains unclear. Thus, in the study, the potential impact of DIN on ARGs and virulence factor genes (VFGs) in aerobic granular sludge (AGS) was investigated in depth using metagenomic binning and functional modules.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!