Integrating and amplifying signal from riboswitch biosensors.

Methods Enzymol

711th Human Performance Wing, Air Force Research Laboratory, Wright-Patterson Air Force Base, Dayton, Ohio, USA.

Published: September 2015

Biosensors offer a built-in energy supply and inherent sensing machinery that when exploited correctly may surpass traditional sensors. However, biosensor systems have been hindered by a narrow range of ligand detection capabilities, a relatively low signal output, and their inability to integrate multiple signals. Integration of signals could increase the specificity of the sensor and enable detection of a combination of ligands that may indicate environmental or developmental processes when detected together. Amplifying biosensor signal output will increase detector sensitivity and detection range. Riboswitches offer the potential to widen the diversity of ligands that may be detected, and advances in synthetic biology are illuminating myriad possibilities in signal processing using an orthogonal parts-based engineering approach. In this chapter, we describe the design, building, and testing of a riboswitch-based Boolean logic AND gate in bacteria, where an output requires the activation of two riboswitches, and the biological circuitry required to amplify the output of the AND gate using natural extracellular bacterial communication signals to "wire" cells together.

Download full-text PDF

Source
http://dx.doi.org/10.1016/bs.mie.2014.10.032DOI Listing

Publication Analysis

Top Keywords

signal output
8
integrating amplifying
4
signal
4
amplifying signal
4
signal riboswitch
4
riboswitch biosensors
4
biosensors biosensors
4
biosensors offer
4
offer built-in
4
built-in energy
4

Similar Publications

Dual DNAzyme amplification-based colorimetric sensing assay for the identification and quantification of tumor-associated miRNAs.

Talanta

December 2024

State Key Laboratory of Chemo/Bio-Sensing and Chemometrics, College of Chemistry and Chemical Engineering, Hunan University, Changsha, 410082, China. Electronic address:

Herein, we present a colorimetric sensing strategy for the identification and quantification of tumor-associated miRNAs based on dual DNAzyme amplification. In this sensing ensemble, the substrate portion of the Pb-dependent 8-17 DNAzyme combines with the G-quadruplex portion to form a hairpin substrate strand. The two split 8-17 DNAzyme strands are partially complementary to the substrate strand and serve as a recognition unit for binding the target miRNA.

View Article and Find Full Text PDF

Stable isotopes of carbon (δC) and nitrogen (δN) are commonly employed to reconstruct past change in marine ecosystems and nutrient cycling. However, multiple biogeochemical and physical drivers govern spatiotemporal variability of these isotopic signals, particularly in dynamic coastal systems, complicating interpretation. Here, we coupled a modern multi-year (2010-2019) δC and δN isoscape record from intertidal mussels (Mytilus californianus) with high-resolution ocean model output and satellite chlorophyll-a observations in the California Current System (32°-43° N) to identify major drivers of isotopic variability.

View Article and Find Full Text PDF

Robust and ultra-thin nanocellulose/MXene composite film and its performance in efficient electricity-generation and sensing.

Int J Biol Macromol

December 2024

Department of Plastic and Cosmetic Surgery, Treatment Center of Burn and Trauma, Affiliated Hospital of Jiangnan University, Wuxi 214122, China. Electronic address:

The conversion of mechanical energy into electrical energy by triboelectric nanogenerators (TENG) has attracted attention in recent years, particularly in the field of wearable sensor. In this work, TEMPO-oxidized cellulose nanofibers (TOCNF) with carboxylate groups were compounded with MXene to serve as both the negative friction layer and the electrode in assembling a TENG with nylon. The synergistic effect between TOCNF and MXene was analyzed to disclose its influence on the performance of the as-prepared TENG.

View Article and Find Full Text PDF

Enhanced accuracy in first-spike coding using current-based adaptive LIF neuron.

Neural Netw

December 2024

Communications and Signal Processing Group, Department of Electrical and Electronic Engineering, Imperial College London, London, SW7 2AZ, United Kingdom.

First spike timings are crucial for decision-making in spiking neural networks (SNNs). A recently introduced first-spike (FS) coding method demonstrates comparable accuracy to firing-rate (FR) coding in processing complex temporal information through supervised learning. However, its performance still falls behind advanced approaches.

View Article and Find Full Text PDF

Novel and simple spectrophotometric and distance based procedures for thiols (L-cysteine, N-acetylcysteine, and glutathione) determination in biological fluids and pharmaceuticals have been proposed based on their inhibitory action on the oxidation of catechol in the presence of Agaricus bisporus crude extract (ABE). The influence of L-glycine, L-alanine, L-proline, L-methionine, L-cystine, ascorbic acid, uric acid, and bilirubin on the thiol determination has been investigated. Uric acid, bilirubin, L-cystine (oxidized thiol), and L-amino acids do not interfere with the determination.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!