Conformations of n-butyl imidazole (B-IMID) were studied using matrix isolation infrared spectroscopy by trapping in argon, xenon and nitrogen matrixes using an effusive nozzle source. The experimental studies were supported by DFT computations performed at the B3LYP/6-311++G(d,p) level. Computations identified nine unique minima for B-IMID, corresponding to conformers with tg(±)tt, tg(±)g(∓)t, tg(±)g(±)t, tg(±)tg(±), tg(±)tg(∓), tg(±)g(∓)g(∓), tg(±)g(±)g(±), tg(±)g(∓)g(±) and tg(±)g(±)g(∓) structures, given in order of increasing energy. Computations of the transition state structures connecting the higher energy conformers to the global minimum, tg(±)tt structure were carried out. The barriers for the conformer inter-conversion were found to be ∼2 kcal/mol. Natural Bond Orbital (NBO) analysis was performed to understand the reasons for conformational preferences in B-IMID.
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http://dx.doi.org/10.1016/j.saa.2014.12.025 | DOI Listing |
Sci Rep
December 2024
POLYMAT and Departamento de Química Aplicada, Facultad de Ciencias Químicas, University of the Basque Country UPV/EHU, Joxe Mari Korta Zentroa, Tolosa hiribidea, 72, 20018, Donostia, Spain.
The anti-polyelectrolyte effect, a characteristic unique to polymer chains containing zwitterions, was investigated for its impact on colloidal stabilization during emulsion polymerization and on the resulting polymer characteristics. The zwitterionic monomer (ZM) 3-[(3-Acrylamidopropyl)dimethylammonio]propane-1-sulfonate (A3361) was selected for the synthesis of 30 wt% emulsifier-free methyl methacrylate/n-butyl acrylate (MMA/n-BA) polymer latex. Three pH conditions were examined: neutral, where the zwitterionic chains are in a collapsed state, and acidic and basic, where these chains adopt an extended conformation, leading to the anti-polyelectrolyte effect.
View Article and Find Full Text PDFInt J Biol Macromol
December 2024
Department of Agricultural, Food and Environmental Sciences, Polytechnic University of Marche, I-60131 Ancona, Italy. Electronic address:
To fully understand enzymatic dynamics, it is essential to explore the complete conformational space of a biological catalyst. The catalytic mechanism of the nickel-dependent urease, the most efficient enzyme known, holds significant relevance for medical, pharmaceutical, and agro-environmental applications. A critical aspect of urease function is the conformational change of a helix-turn-helix motif that covers the active site cavity, known as the mobile flap.
View Article and Find Full Text PDFInt J Biol Macromol
October 2024
Anhui Engineering Research Center of Highly Reactive Micro-Nano Powders, School of Materials and Environmental Engineering, Chizhou University, Chizhou 247000, PR China. Electronic address:
Nonconjugated fluorescent polymers devoid of large π-π conjugated structures have received considerable attention due to their significant academic importance and broad application potentials in various fields. Herein, we report an effective strategy to fabricate multifunctional fluorescent amylopectin derivatives and reveal their unique aspects of aggregation-induced emission (AIE), cryogenic long-persistent phosphorescence (~6 s) and excellent processabilities characteristics, which are extremely different from traditional luminogens. These amylopectin-graft-poly(n-butyl acrylate-co-1-vinylimidazole) copolymers (Amylopectin-BVs) prepared by the grafting-from method employing RAFT and experienced subsequently with metal-ligand cross-linking.
View Article and Find Full Text PDFActa Crystallogr C Struct Chem
August 2024
Centro Conjunto de Investigación en Química Sustentable UAEM-UNAM, km 14.5 Carretera Toluca-Atlacomulco, Toluca, C.P. 50200, México.
Chem Biol Interact
October 2023
Unit of Excellence in Computational Molecular Science and Catalysis, and Division of Chemistry, School of Science, University of Phayao, Phayao, 56000, Thailand. Electronic address:
The crystal structure of the Thermoanaerobacterium xylanolyticum in glycoside hydrolase family 116 (TxGH116) β-glucosidase provides a structural model for human GBA2 glucosylceramidase, an enzyme defective in hereditary spastic paraplegia and a potential therapeutic target for treating Gaucher disease. To assess the therapeutic potential of known inhibitors, the X-ray structure of TxGH116 in complex with isofagomine (IFG) was determined at 2.0 Å resolution and showed the IFG bound in a relaxed chair conformation.
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