Fluorescent labeling is a mainstream technology for detecting molecular binding. Despite the importance, few studies have been devoted to quantitatively examine the effect of labeling on the molecular binding processes. Here we present a quantitative study on the binding kinetics of fluorescent-labeled and un-labeled molecules (lectin proteins) with glycoproteins on the membrane of cells using surface plasmon resonance imaging (SPRi) technique. The study shows that fluorescent labeling has a significant influence on the binding behaviors of proteins, especially the association processes, and the influence depends sensitively on the charge of fluorescent labels. It further shows that the labels also affect the local distribution of probe proteins, due to the inhomogeneous surface charge distribution of the cell membrane. Our work indicates that fluorescent labeling in general affects the binding behaviors, but proper design of the label will help to minimize its effect.
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http://dx.doi.org/10.1016/j.bios.2014.11.036 | DOI Listing |
Eur J Histochem
January 2025
Department of Critical Care Medicine, The Qujing No.1 People's Hospital, Qujing.
Intestinal barrier damage causes an imbalance in the intestinal flora and microbial environment, promoting a variety of gastrointestinal diseases. This study aimed to explore the mechanism by which adipose-derived stem cells (ADSCs) repair intestinal barrier damage. The human colon adenocarcinoma cell line Caco-2 and rats were treated with lipopolysaccharide (LPS) to establish in vitro and in vivo models, respectively, of intestinal barrier damage.
View Article and Find Full Text PDFAnalyst
January 2025
Department of Chemical and Biological Engineering, Andong National University, Andong, Republic of Korea.
Here, we developed a novel, cost-effective fluorescence light-up biosensor for Pb detection based on a label-free G-quadruplex combined with modified thioflavin T (ThT) derivatives. Among the various G-quadruplex sequences tested, only T2 exhibited fluorescence light-up properties upon interacting with the modified ThT derivatives in the presence of Pb. To enhance the Pb sensing system, we also compared modified ThT derivatives, including the newly synthesized propyl-substituted ThT (ThT-P) and butyl-substituted ThT (ThT-B).
View Article and Find Full Text PDFAnal Chem
January 2025
Institute of Physical Science and Information Technology, Information Materials and Intelligent Sensing Laboratory of Anhui Province, Key Laboratory of Structure and Functional Regulation of Hybrid Materials of Ministry of Education, Anhui University, Hefei, Anhui 230601, China.
Real-time monitoring of the dynamics of cytosolic RNA-protein condensates, termed stress granules (SGs), is vital for understanding their biological roles in stress response and related disease treatment but is challenging due to the lack of simple and accurate methods. Compared with protein visualization that requires complex transfection procedures, direct RNA labeling offers an ideal alternative for tracking SG dynamics in living cells. Here, we propose a novel molecular design strategy to construct a near-infrared RNA-specific fluorescent probe () for tracking SGs in living cells.
View Article and Find Full Text PDFAnal Chim Acta
February 2025
School of Chemistry and Chemical Engineering, Beijing Institute of Technology, Beijing, 100081, PR China. Electronic address:
Exosomes, which are known to transport diverse proteins from parent cells to recipient cells, consequently influence the biological activities of the recipient cells. Among those proteins, the epithelial cell adhesion molecule (EpCAM), plays a crucial role as it is implicated in cell adhesion and signaling processes. As exosomal EpCAM potentially affects the migration of recipient cells, direct visualization with high spatial resolution is essential to better understand this impact and the role of exosomal EpCAM in recipient cells.
View Article and Find Full Text PDFSpectrochim Acta A Mol Biomol Spectrosc
January 2025
School of Chemistry and Chemical Engineering, Jiangsu University, Zhenjiang 212013, PR China.
A new corrole derivative bearing 8-hydroxyquinoline moiety, which was labeled as 8-HQ-Corrole, serves as an efficient fluorescent probe for Mg in the presence of various interferents. This probe 8-HQ-Corrole displayed an ultra-fast response (2 s) to Mg with an impressive detection limit (33 nM) and a significant fluorescence enhancement, accompanying with a blue shift from 667 to 653 nm in fluorescence spectrum. MS and Job's plot analysis indicated that the enhanced fluorescence response was attributable to the formation of 1:2 stoichiometric complex between to Mg and 8-HQ-Corrole involving quinoline nitrogen and oxygen atoms.
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