Workflow for automated quantification of cerebromicrovascular gelatinase activity.

Microvasc Res

Research Programs Unit, Molecular Neurology, and Department of Clinical Neurosciences, University of Helsinki, Helsinki, Finland; Department of Neurology, Helsinki University Central Hospital, Finland.

Published: January 2015

The gelatinase enzymes, matrix metalloproteinases -2 and -9, are central mediators of blood-brain barrier disruption, actively studied in experimental models of neurological disease. Staining with in situ zymography (ISZ) allows visualization of gelatinase activity directly in brain tissue sections. However, quantifying microvascular gelatinase activity from ISZ-images is challenging and time consuming, as surrounding cell types often show significant confounding activity. We describe validation and performance of a workflow for automated image analysis of cerebromicrovascular gelatinase activity, now released for open-access use. In comparison to manual analysis, the automated workflow showed superior accuracy, was faster to execute and allows for more detailed analysis of heterogeneity in the microvasculature. We further suggest recommendations for quantifying and reporting this type of activity in experimental studies, focusing on ischemic stroke.

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http://dx.doi.org/10.1016/j.mvr.2014.08.009DOI Listing

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