Intravascular fibrin clots are resolved by plasmin acting at the interface of gel phasesubstrate and fluid-borne enzyme. The classic Michaelis.Menten kinetic scheme cannot describe satisfactorily this heterogeneous-phase proteolysis because it assumes homogeneous well-mixed conditions. A more suitable model for these spatial constraints,known as fractal kinetics, includes a time-dependence of the Michaelis coefficient Km(F) = Km0F (1+ t)h, where h is a fractal exponent of time, t. The aim of the present study was to build up and experimentally validate a mathematical model for surface-acting plasmin that can contribute to a better understanding of the factors that influence fibrinolytic rates. The kinetic model was fitted to turbidimetric data for fibrinolysis under various conditions. The model predicted Km0(F) = 1.98 μM and h = 0.25 for fibrin composed of thin fibers and Km0(F) = 5.01 μM and h = 0.16 for thick fibers in line with a slower macroscale lytic rate (due to a stronger clustering trend reflected in the h value) despite faster cleavage of individual thin fibers (seen as lower Km0(F) ). ε-Aminocaproic acid at 1 mM or 8 U/mL carboxypeptidase-B eliminated the time-dependence of Km F and increased the lysis rate suggesting a role of C-terminal lysines in the progressive clustering of plasmin. This fractal kinetic concept gained structural support from imaging techniques. Atomic force microscopy revealed significant changes in plasmin distribution on a patterned fibrinogen surface in line with the time-dependent clustering of fluorescent plasminogen in confocal laser microscopy. These data from complementary approaches support a mechanism for loss of plasmin activity resulting from C-terminal lysine-dependent redistribution of enzyme molecules on the fibrin surface.
Download full-text PDF |
Source |
---|---|
http://dx.doi.org/10.1021/bi500661m | DOI Listing |
Int J Biol Macromol
December 2024
Department of Environmental Engineering, Ondokuz Mayıs Üniversitesi, Samsun, Turkey.
This study aims to develop a stable and efficient magnetic nanocomposite hydrogel (MNCH) for selective removal of methylene blue (MB) and crystal violet (CV). MNCHs with different FeO contents (0-9 wt%) were synthesized following graft co-polymerization method using sodium alginate, acrylamide, itaconic acid, ammonium persulfate and N,N-methylene bisacrylamide. Among them, MNCH, with 5 wt% FeO, showed highest removal efficiency (>95 %).
View Article and Find Full Text PDFEntropy (Basel)
October 2024
Institute of Space Science INFLPR Subsidiary, Atomiștilor 409, 077125 Măgurele, Romania.
The Rank-Ordered Multifractal Analysis (ROMA) is a tool designed to characterize scale (in)variance and multifractality based on rank ordering the fluctuations in "groups" characterized by the same mono-fractal behavior (Hurst exponent). A range-limited structure-function analysis provides the mono-fractal index for each rank-ordered range of fluctuations. We discuss here two examples of multi-scale solar wind turbulence and complexity where ROMA is applied on the following: (a) data collected by Ulysses spacecraft in the fast solar wind, outside the ecliptic, between 25 and 31 January 2007, at roughly 2.
View Article and Find Full Text PDFEnviron Pollut
December 2024
State Key Laboratory of Geomechanics and Geotechnical Engineering, Institute of Rock and Soil Mechanics, Chinese Academy of Sciences, Wuhan, 430071, China; IRSM-CAS/HK Poly U Joint Laboratory on Solid Waste Science, Wuhan, 430071, China; Hubei province Key Laboratory of Contaminated Sludge and Soil Science and Engineering, Wuhan, 430071, China.
Heliyon
October 2024
Institute for Solid State Physics and Optics, HUN-REN Wigner Research Centre for Physics, PO Box 49, H-1525, Budapest, Hungary.
Gamma-radiation initiated polymerization is an easy-to-use and simple technique for the preparation of porous polymer monoliths widely used as active materials in separation columns. Herein, binary porogen mixtures of ethyl acetate/acetone/acetonitrile with methanol were used to synthesize diethylene glycol dimethacrylate monoliths with this technique. Systematic studies have been performed to determine the effect of the composition of the solvent mixture on the morphology and the reaction kinetics, including the growth mechanism and the growth rate.
View Article and Find Full Text PDFSoft Matter
October 2024
ENS de Lyon, CNRS, Laboratoire de Physique, UMR 5672, F-69342 Lyon, France.
Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!