Complete chloroplast genome sequence of Hanabusaya asiatica (Campanulaceae), an endemic genus to Korea.

Mitochondrial DNA A DNA Mapp Seq Anal

a Department of Biological Sciences , Kangwon National University, Chuncheon , Korea.

Published: May 2016

The complete chloroplast genome of Hanabusaya asiatica, an endemic genus to Korea, was determined in this study. The total genome size was 167,287 bp in length, containing a pair of inverted repeats (IRs) of 26,877 bp, which were separated by large single copy (LSC) and small single copy (SSC) of 104,955 and 8578, respectively. The overall GC contents of the plastid genome were 38.8%. One hundred and twelve unique genes were annotated, including 78 protein coding genes, 30 tRNA genes and 4 rRNA genes. In these genes, 17 genes contained 1 intron, and 2 genes comprised of 2 introns.

Download full-text PDF

Source
http://dx.doi.org/10.3109/19401736.2014.958702DOI Listing

Publication Analysis

Top Keywords

complete chloroplast
8
chloroplast genome
8
hanabusaya asiatica
8
endemic genus
8
genus korea
8
single copy
8
genes genes
8
genes
7
genome
4
genome sequence
4

Similar Publications

Background: Caryophyllaceae contains 100 genera and 3000 species, many of which are valuable both ecologically and economically. However, as past research has shown, the fundamental phylogenetic relationships of Caryophyllaceae are still debatable, and molecular dating based on chloroplast genomes has not been thoroughly examined for the entire family.

Methods: In this study, the complete chloroplast genome sequences of Arenaria kansuensis Maxim.

View Article and Find Full Text PDF

(Illiciaceae), an ecologically significant endemic plant, predominantly grows in Guangxi, China, which is the primary region for its cultivation. This area accounts for more than 80% of the total cultivation and yield in China. Despite its importance, comprehensive studies on the chloroplast (cp) genome of are limited.

View Article and Find Full Text PDF

The complete chloroplast genomes and comparative study of the two tung trees of Vernicia (Euphorbiaceae).

BMC Genomics

December 2024

Xinjiang Key Laboratory of Biological Resources and Genetic Engineering, College of Life Science and Technology, Xinjiang University, Urumqi, 830017, China.

Background: Vernicia montana and V. fordii are economically important woody oil species in the Euphorbiaceae that have great industrial oil and ornamental greening properties, however, the wild resources of Vernicia trees have been reduced because of their habitat destruction. Considering the diverse economic and ecological importance of Vernicia species, it is important to collect more molecular data to determine the genetic differences between V.

View Article and Find Full Text PDF

Characterization of the complete mitochondrial genome of the rice bean (Vigna umbellata).

BMC Plant Biol

December 2024

Beijing Key Laboratory of Agricultural Genetic Resources and Biotechnology, Beijing Academy of Agricultural and Forestry Sciences, Beijing, 100097, China.

Background: Rice bean (Vigna umbellata), an underrated legume crop, demonstrates strong adaptability to poor soil fertility and has significant potential to enhance global food security. It is valuable both as a vegetable and fodder crop due to its high protein content, essential fatty acids, and micronutrients. Despite the sequencing of a high-quality genome of rice bean, its mitochondrial genome (mitogenome) sequence has not yet been reported.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!