The F420-reducing hydrogenase has been known as a key enzyme in methanogenesis. Its homologs have been identified in non-methanogenic hyperthermophilic archaea, including Thermococcus onnurineus NA1, but neither physiological function nor biochemical properties have been reported to date. The enzyme of T. onnurineus NA1 was distinguished from those of other methanogens and the members of the family Desulfurobacteriaceae with respect to the phylogenetic distribution of the α and β subunits, organization of frhAGB genes and conservation of F420-coordinating residues. RT-qPCR and Western blot analyses revealed frhA gene is not silent but is expressed in T. onnurineus NA1 grown in the presence of sulfur, carbon monoxide, or formate. The trimeric enzyme complex was purified to homogeneity via affinity chromatography from T. onnurineus NA1 and exhibited catalytic activity toward the electron acceptors such as viologens and flavins but not the deazaflavin coenzyme F420. This is the first biochemical study on the function of the frhAGB-encoding enzyme from a non-methanogenic archaea.
Download full-text PDF |
Source |
---|---|
http://dx.doi.org/10.1007/s00792-014-0689-y | DOI Listing |
Appl Environ Microbiol
December 2023
Marine Biotechnology Research Center, Korea Institute of Ocean Science & Technology, Busan, South Korea.
The strategy using structural homology with the help of structure prediction by AlphaFold was very successful in finding potential targets for the -encoded hydrogenase of NA1. The finding that the hydrogenase can interact with FdhB to reduce the cofactor NAD(P) is significant in that the enzyme can function to supply reducing equivalents, just as F-reducing hydrogenases in methanogens use coenzyme F as an electron carrier. Additionally, it was identified that NA1 could produce formate from H and CO by the concerted action of -encoded hydrogenase and formate dehydrogenase Fdh3.
View Article and Find Full Text PDFNucleic Acids Res
October 2023
Department of Chemistry & Nanoscience, Ewha Womans University, Seoul 03760, Republic of Korea.
Thermococcus onnurineus NA1, a hyperthermophilic carboxydotrophic archaeon, produces H2 through CO oxidation catalyzed by proteins encoded in a carbon monoxide dehydrogenase (CODH) gene cluster. TON_1525 with a DNA-binding helix-turn-helix (HTH) motif is a putative repressor regulating the transcriptional expression of the codh gene cluster. The T55I mutation in TON_1525 led to enhanced H2 production accompanied by the increased expression of genes in the codh cluster.
View Article and Find Full Text PDFInt J Mol Sci
October 2022
Key Laboratory for Molecular Enzymology and Engineering of Ministry of Education, School of Life Science, Jilin University, Changchun 130021, China.
Pyrophosphate (PP) is a byproduct of over 120 biosynthetic reactions, and an overabundance of PP can inhibit industrial synthesis. Pyrophosphatases (PPases) can effectively hydrolyze pyrophosphate to remove the inhibitory effect of pyrophosphate. In the present work, a thermophilic alkaline inorganic pyrophosphatase from NA1 was studied.
View Article and Find Full Text PDFFront Microbiol
March 2022
Marine Biotechnology Research Centre, Korea Institute of Ocean Science and Technology, Busan, South Korea.
Appl Environ Microbiol
April 2020
Korea Institute of Ocean Science and Technology, Busan, Republic of Korea
Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!