Expression, high-pressure refolding, purification, crystallization and preliminary X-ray analysis of a novel single-strand-specific 3'-5' exonuclease PhoExo I from Pyrococcus horikoshii OT3.

Acta Crystallogr F Struct Biol Commun

Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan.

Published: August 2014

AI Article Synopsis

  • PhoExo I is a DNA-repair exonuclease from the organism Pyrococcus horikoshii OT3, specific to Thermococcales.
  • The protein was produced in E. coli as inclusion bodies, which were then solubilized using a high-pressure refolding method.
  • Successful crystallization of PhoExo I occurred at 20°C, resulting in a crystal that diffracted X-rays to 1.52 Å resolution and contained two molecules of the protein in its asymmetric unit.

Article Abstract

PhoExo I is a single-strand-specific 3'-5' exonuclease from Pyrococcus horikoshii OT3 and is thought to be involved in a Thermococcales-specific DNA-repair pathway. The recombinant PhoExo I protein was produced as inclusion bodies in Escherichia coli cells. Solubilization of the inclusion bodies was performed by the high-pressure refolding method and highly purified protein was subjected to crystallization by the sitting-drop vapour-diffusion method at 20°C. A crystal of PhoExo I was obtained in a reservoir solution consisting of 0.1 M Tris-HCl pH 8.9, 27% PEG 6000 and diffracted X-rays to 1.52 Å resolution. The crystal of PhoExo I belonged to space group H32, with unit-cell parameters a = b = 112.07, c = 202.28 Å. The crystal contained two PhoExo I molecules in the asymmetric unit.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4118808PMC
http://dx.doi.org/10.1107/S2053230X14012734DOI Listing

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