Insight into the key factors driving the competition of halogen and hydrogen bonds is obtained by studying the affinity of the Lewis bases trimethylamine (TMA), dimethyl ether (DME), and methyl fluoride (MF) towards difluoroiodomethane (CHF(2) I). Analysis of the infrared and Raman spectra of solutions in liquid krypton containing mixtures of TMA and CHF(2) I and of DME and CHF(2) I reveals that for these Lewis bases hydrogen and halogen-bonded complexes appear simultaneously. In contrast, only a hydrogen-bonded complex is formed for the mixtures of CHF(2) I and MF. The complexation enthalpies for the C-H⋅⋅⋅Y hydrogen-bonded complexes with TMA, DME, and MF are determined to be -14.7(2), -10.5(5) and -5.1(6) kJ mol(-1), respectively. The values for the C-I⋅⋅⋅Y halogen-bonded isomers are -19.0(3) kJ mol(-1) for TMA and -9.9(8) kJ mol(-1) for DME. Generalization of the observed trends suggests that, at least for the bases studied here, softer Lewis bases such as TMA favor halogen bonding, whereas harder bases such as MF show a substantial preference for hydrogen bonding.
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bioRxiv
January 2025
Institute for Genomics and Evolutionary Medicine, Temple University, Philadelphia, PA 19122, USA.
Cases abound in which nearly identical traits have appeared in distant species facing similar environments. These unmistakable examples of adaptive evolution offer opportunities to gain insight into their genetic origins and mechanisms through comparative analyses. Here, we present a novel comparative genomics approach to build genetic models that underlie the independent origins of convergent traits using evolutionary sparse learning.
View Article and Find Full Text PDFChemistry
January 2025
Department of Chemistry, The University of Western Ontario, London, ON, N6A 5B7, Canada.
The exploration of phosphorus-nitrogen heterocycles derived from chelating N-donor ligands is an area of research that has lagged behind the development of similar heterocycles based on other main group elements, most notably boron. The fact that phosphorus and nitrogen are both group 15 elements and that their compounds are most commonly viewed as Lewis bases likely contributes to this observation. However, through judicious ligand design and creative use of phosphorus sources that render phosphorus as Lewis acidic and/or electron poor, a variety of heterocyclic architectures are possible.
View Article and Find Full Text PDFDalton Trans
January 2025
Dipartimento di Chimica Industriale "Toso Montanari", Università di Bologna, Via P. Gobetti 85, 40129 Bologna, Italy.
In this Frontier Article, the work carried out within our research group in Bologna in the field of surface decorated metal carbonyl clusters will be outlined and put in a more general context. After a short Introduction, clusters composed of a metal carbonyl core decorated on the surface by metal-ligand fragments will be analyzed. Both metal-ligand fragments behaving as Lewis acids and Lewis bases will be considered.
View Article and Find Full Text PDFNat Commun
January 2025
National Key Laboratory of Electronic Films and Integrated Devices, School of Integrated Circuit Science and Engineering, University of Electronic Science and Technology of China, Chengdu, P. R. China.
Suppressing deep-level defects at the perovskite bulk and surface is indispensable for reducing the non-radiative recombination losses and improving efficiency and stability of perovskite solar cells (PSCs). In this study, two Lewis bases based on chalcogen-thiophene (n-Bu4S) and selenophene (n-Bu4Se) having tetra-pyridine as bridge are developed to passivate defects in perovskite film. The uncoordinated Pb and iodine vacancy defects can interact with chalcogen-concave group and pyridine group through the formation of the Lewis acid-base adduct, particularly both the defects can be surrounded by concave molecules, resulting in effective suppression charge recombination.
View Article and Find Full Text PDFMolecules
December 2024
Department of Biological and Chemical Sciences, The University of the West Indies, Cave Hill Campus, Wanstead P.O. Box 64, Barbados.
A computational study of X-H···Y binary hydrogen-bonded complexes was undertaken to examine the red- and blue-shifting behavior of three model X-H proton donors interacting with a series of Lewis bases: Y = NH, NCLi, NCH, NCF, CH, BF, CO, N and Ne. Two of these proton donors, FArH and FCH, have blue-shifting tendencies, while the third, FH, has red-shifting tendencies. A perturbation theory model for frequency shifts that was derived many years ago was employed to partition the predicted frequency shift into the sum of two components, one dependent on the second derivative of the interaction energy with respect to X-H displacement and the other dependent on the X-H bond length change in the binary complex.
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